Phyre 2 alignment of P36682 with c3r3sD

Job Description P36682
Confidence 33.54% Date Thu Jan 5 11:53:47 GMT 2012

Rank 18 Aligned Residues 17

% Identity 24% Template c3r3sD_

PDB info PDB header:oxidoreductase Chain: D: PDB Molecule:oxidoreductase; PDBTitle: structure of the ygha oxidoreductase from salmonella enterica

Resolution 1.25 Å

	Insertion relative to template
	Deletion relative to template
	Catalytic residue from the CSA

Detailed help on interpreting your alignment

	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence	Y	N	P	T	V	V	Y	G	N	W	A	N	T	A	Y	P	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence	Y	D	P	T	T	Q	Y	Y	T	G	E	Y	P	K	Q	K	Q
Template Known Secondary structure			G	G	G	S	S			S
Template Predicted Secondary structure
Template SS confidence
	5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.

Download:

Text version

FASTA pairwise alignment

3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server

Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]

© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys
Disclaimer
Terms and Conditions