Job Description P0ABY4 Confidence 98.72% Date Thu Jan 5 11:16:42 GMT 2012 Rank 57 Aligned Residues 147 % Identity 17% Template c3fvwA_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:putative nad(p)h-dependent fmn reductase; PDBTitle: crystal structure of the q8dwd8_strmu protein from2 streptococcus mutans. northeast structural genomics3 consortium target smr99. Resolution 2.30 Å

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		2	.	.	.	.	.	.	.	10	.			.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40																				.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60
Predicted Secondary structure												.	.																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence												.	.																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		N	M	G	L	F	Y	G	S	S	T	.	.	C	Y	T	E	M	A	A	E	K	I	R	D	I	I	G	P	E	L	V	T	L	H	N	L	K	D	D	S	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	L	M	E	Q	Y	D	V	L	I	L	G	I	P	T	W	D	F	G	E
Query Conservation												.	.																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence												.	.															.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.
Template Conservation																												.																																																		.
Template Sequence		R	I	L	F	I	V	G	S	F	S	E	G	S	F	N	R	Q	L	A	K	K	A	E	T	I	I	.	G	D	R	A	Q	V	S	Y	L	S	Y	D	R	V	P	F	F	N	Q	D	L	E	T	S	V	H	P	E	V	A	H	A	R	E	E	V	Q	E	A	D	A	I	W	I	F	S	P	V	Y	.	N	Y	A
Template Known Secondary structure								S			S	T	T															.	T	T	S	S								S	S						G	G	G	T	T	S																S									B	.	T	T	B
Template Predicted Secondary structure																												.																																																		.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.		30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.		.	80	.
		61	.	.	.	.	.	.	.	.	70	.	.											.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130
Predicted Secondary structure														.	.	.	.	.	.	.	.	.	.
Query SS confidence														.	.	.	.	.	.	.	.	.	.
Query Sequence		I	Q	E	D	W	E	A	V	W	D	Q	L	.	.	.	.	.	.	.	.	.	.	D	D	L	N	L	E	G	K	I	V	A	L	Y	G	L	G	D	Q	L	G	Y	G	E	W	F	L	D	A	L	G	M	L	H	D	K	L	S	T	K	G	V	K	F	V	G	Y	W	P	T	E	G	Y	E	F	T	S	P	K
Query Conservation														.	.	.	.	.	.	.	.	.	.
Alig confidence														.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.
Template Conservation																																												.	.	.	.	.	.	.
Template Sequence		I	P	G	P	V	K	N	L	L	D	W	L	S	R	S	L	D	L	S	D	P	T	G	P	S	V	L	Q	D	K	I	V	T	V	S	S	V	A	N	G	A	E	.	.	.	.	.	.	.	V	F	E	D	Y	R	S	L	L	P	F	I	R	X	H	L	V	D	Q	L	T	G	V	P	I	N	S	E	A	W	S
Template Known Secondary structure														T	S		S		S	S		T	T	S			T	T	T	T									S					.	.	.	.	.	.	.		S										T	T														T	T
Template Predicted Secondary structure																																												.	.	.	.	.	.	.
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.								.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
		131	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170
Predicted Secondary structure
Query SS confidence
Query Sequence		P	V	I	A	D	G	Q	L	F	V	G	L	A	L	D	E	T	N	Q	Y	D	L	S	D	E	R	I	Q	S	W	C	E	Q	I	L	N	E	M	A	E
Query Conservation
Alig confidence			.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation			.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		T	.	.	.	.	.	.	.	.	.	.	.	.	.	G	I	L	K	V	S	A	E	K	L	A	E	L	S	A	Q	A	D	A	L	L	S	A	I	E	N
Template Known Secondary structure			.	.	.	.	.	.	.	.	.	.	.	.	.																								T	T
Template Predicted Secondary structure			.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		158														.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions