Job Description P0ABY4 Confidence 98.50% Date Thu Jan 5 11:16:42 GMT 2012 Rank 61 Aligned Residues 142 % Identity 17% Template c3f2vA_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:general stress protein 14; PDBTitle: crystal structure of the general stress protein 142 (tde0354) in complex with fmn from treponema denticola,3 northeast structural genomics consortium target tdr58. Resolution 2.00 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.			30	.	.	.	.	.	.	.	.	.	40	.											.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																														.	.													.	.	.	.	.	.	.	.	.	.
Query SS confidence																														.	.													.	.	.	.	.	.	.	.	.	.
Query Sequence		N	M	G	L	F	Y	G	S	S	T	C	Y	T	E	M	A	A	E	K	I	R	D	I	I	G	P	E	L	.	.	V	T	L	H	N	L	K	D	D	S	P	K	.	.	.	.	.	.	.	.	.	.	L	M	E	Q	Y	D	V	L	I	L	G	I	P	T	W	D	F	G	E	I	Q	E	D	W	E	A	V	W
Query Conservation																														.	.													.	.	.	.	.	.	.	.	.	.
Alig confidence																														.	.													.	.	.	.	.	.	.	.	.	.																.
Template Conservation																																																																					.
Template Sequence		K	T	L	I	I	L	A	H	P	N	I	S	Q	S	T	V	H	K	H	W	S	D	A	V	R	Q	H	T	D	R	F	T	V	H	E	L	Y	A	V	Y	P	Q	G	K	I	D	V	A	A	E	Q	K	L	I	E	T	H	D	S	L	V	W	Q	F	P	I	Y	.	W	F	N	C	P	P	L	L	K	Q	W	L
Template Known Secondary structure										T	T	G	G	G		S										T	T		T	T	T											T	T														T	S	S	S								B	.	T	T	B
Template Predicted Secondary structure																																																																					.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.		70	.	.	.	.	.	.	.	.	.	80	.
		70	.	.										.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.									.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.
Predicted Secondary structure					.	.	.	.	.	.	.	.	.																							.	.	.	.	.	.	.	.
Query SS confidence					.	.	.	.	.	.	.	.	.																							.	.	.	.	.	.	.	.
Query Sequence		D	Q	L	.	.	.	.	.	.	.	.	.	D	D	L	N	L	E	G	K	I	V	A	L	Y	G	L	G	D	Q	L	G	Y	G	.	.	.	.	.	.	.	.	E	W	F	L	D	A	L	G	M	L	H	D	K	L	S	T	K	G	V	K	F	V	G	Y	W	P	T	E	G	Y	E	F	T	S	P	K	P	V
Query Conservation					.	.	.	.	.	.	.	.	.																							.	.	.	.	.	.	.	.
Alig confidence					.	.	.	.	.	.	.	.	.																							.	.	.	.	.	.	.	.																														.	.	.	.	.	.	.	.	.
Template Conservation																																																																									.	.	.	.	.	.	.	.	.
Template Sequence		D	E	V	L	T	Y	G	W	A	Y	G	S	K	G	K	A	L	K	G	R	K	I	A	L	A	V	S	L	G	A	P	A	A	D	Y	R	A	D	G	A	V	G	C	S	V	A	E	V	L	R	P	F	E	L	T	A	K	Y	C	N	A	D	Y	R	P	P	F	T	F	H	T	.	.	.	.	.	.	.	.	.
Template Known Secondary structure					S		B	T	T	T	B	S	S	S			S	S	T	T										S	S		G	G	G	S	S	T	T	S	S	S		S																T	T												.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																									.	.	.	.	.	.	.	.	.
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.
		133	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170
Predicted Secondary structure
Query SS confidence
Query Sequence		I	A	D	G	Q	L	F	V	G	L	A	L	D	E	T	N	Q	Y	D	L	S	D	E	R	I	Q	S	W	C	E	Q	I	L	N	E	M	A	E
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	E	A	A	R	Q	E	V	E	R	S	A	R	D	Y	L	A	W	L	D	A
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																			160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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