Job Description P0ABY4 Confidence 98.51% Date Thu Jan 5 11:16:42 GMT 2012 Rank 60 Aligned Residues 151 % Identity 18% Template c2vzhA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:nadh-dependent fmn reductase; PDBTitle: structures of nadh:fmn oxidoreductase (emob)-fmn complex Resolution 2.5 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		2	.	.	.	.	.	.	.	10	.	.			.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.		.	30	.	.	.	.	.	.	.	.	.	40	.																				.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.
Predicted Secondary structure													.	.																	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence													.	.																	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		N	M	G	L	F	Y	G	S	S	T	C	.	.	Y	T	E	M	A	A	E	K	I	R	D	I	I	G	P	E	.	L	V	T	L	H	N	L	K	D	D	S	P	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	M	E	Q	Y	D	V	L	I	L	G	I	P	T	W	D	F	G
Query Conservation													.	.																	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence													.	.																	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.
Template Conservation																																																																															.
Template Sequence		S	I	V	A	I	S	G	S	P	S	R	N	S	T	T	A	K	L	A	E	Y	A	L	A	H	V	L	A	R	S	D	S	Q	G	R	H	I	H	V	I	D	L	D	P	K	A	L	L	R	G	D	L	S	N	A	K	L	K	E	A	V	D	A	T	C	N	A	D	G	L	I	V	A	T	P	I	Y	.	K	A
Template Known Secondary structure										S	S	S	S																T	T	S	S								G	G	G	S								T		T	T	S														S									B	.	T	T
Template Predicted Secondary structure																																																																															.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80		.	.
		60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	I	Q	E	D	W	E	A	V	W	D	Q	L	D	D	L	N	L	E	G	K	I	V	A	L	Y	G	L	G	D	Q	L	G	Y	G	E	W	F	L	D	A	L	G	M	L	H	D	K	L	S	T	K	G	V	K	F	V	G	Y	W	P	T	E	G	Y	E	F	T	S	P	K	P	V	I	A	D	G	Q	L	F
Query Conservation
Alig confidence																																			.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																			.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		S	Y	T	G	L	L	K	A	F	L	D	I	L	P	Q	F	A	L	A	G	K	A	A	L	P	L	A	T	G	G	S	P	A	.	.	.	H	V	L	A	L	D	Y	G	L	R	P	V	L	H	S	M	G	V	R	H	V	V	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	F	F	L
Template Known Secondary structure		B										T	T	S		T	T	T	T	B	T										S	S	G	G	.	.	.	G	G	G													T	T	B	S					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																			.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.				.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.																		.	140	.	.
		140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	G	L	A	L	D	E	T	N	Q	Y	D	L	S	D	E	R	I	Q	S	W	C	E	Q	I	L	N	E	M	A	E	H	Y	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	Q	S	Q	F	S	V	V	D	G	K	L	A	V	E	D	D	V	A	S	Q	L	N	N	A	I	D	H	F	R	L	S	L	S
Template Known Secondary structure			S	T	T			S	S	S	S	S	S	S	S																		T
Template Predicted Secondary structure
Template SS confidence
		143	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions