Job Description P77147 Confidence 99.24% Date Thu Jan 5 12:25:38 GMT 2012 Rank 1 Aligned Residues 204 % Identity 13% Template c1ygvA_ PDB info PDB header:structural protein/contractile protein Chain: A: PDB Molecule:collagen i alpha 1; PDBTitle: the structure of collagen type i. single type i collagen2 molecule: rigid refinment Resolution 5.16 Å

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		61	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.		.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.		.	.	.	.	.	.
Predicted Secondary structure																																																									.																		.
Query SS confidence																																																									.																		.
Query Sequence		D	E	N	F	A	H	Q	E	V	S	S	M	Q	K	L	A	T	D	P	G	E	R	P	F	C	S	Q	F	A	R	S	D	D	H	A	R	I	G	C	C	E	D	N	A	R	I	A	T	A	G	Y	A	A	Q	I	.	A	S	M	G	Y	S	V	R	I	G	S	V	G	F	N	S	H	.	I	G	S	S	G	E
Query Conservation																																																									.																		.
Alig confidence																																																									.																		.
Template Conservation
Template Sequence		E	M	S	Y	G	Y	D	E	K	S	T	G	I	S	V	P	G	P	M	G	P	S	G	P	R	G	L	G	P	G	A	G	P	Q	G	F	Q	G	P	G	E	G	E	G	A	S	G	P	M	G	P	R	G	P	G	P	G	K	N	G	D	D	G	E	A	G	K	P	G	R	G	E	R	G	P	G	P	Q	G	A
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		139	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	A	R	V	A	V	T	G	N	S	S	R	I	S	S	A	G	D	S	S	R	I	A	N	T	G	M	R	V	R	V	C	T	L	G	E	R	C	H	V	A	S	N	G	D	L	V	Q	I	A	S	F	G	A	N	A	R	I	A	N	S	G	D	N	V	H	I	I	A	S	G	E	N	S	T	V	V	S	T	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	G	L	G	T	A	G	L	G	M	G	H	R	G	F	S	G	L	D	G	A	K	G	D	A	G	P	A	G	P	K	G	E	G	S	G	E	N	G	A	G	Q	M	G	P	R	G	L	G	E	R	G	R	G	A	G	P	A	G	A	R	G	N	D	G	A	A	G	A	A	G	P	G	P	T	G	P	T	G	P
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170
		219	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	V	D	S	I	I	L	G	P	G	G	S	A	A	L	A	Y	H	D	G	E	R	V	R	F	A	V	A	I	E	G	E	N	N	I	R	A	G	V	R	Y	R	L	N	E	Q	H	Q	F	V
Query Conservation
Alig confidence		.	.																						.	.
Template Conservation		.	.																						.	.
Template Sequence		.	.	G	F	G	A	V	G	A	K	G	E	A	G	P	E	G	A	R	G	S	E	G	.	.	P	Q	G	V	R	G	E	G	P	G	P	A	G	A	A	G	P	A	G	N	G	A	D	G	Q
Template Known Secondary structure		.	.																						.	.
Template Predicted Secondary structure		.	.																						.	.
Template SS confidence
				182	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.			.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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