Job Description P77147 Confidence 11.15% Date Thu Jan 5 12:25:38 GMT 2012 Rank 61 Aligned Residues 20 % Identity 35% Template c1ceuA_ PDB info PDB header:viral protein Chain: A: PDB Molecule:protein (hiv-1 regulatory protein n-terminal PDBTitle: nmr structure of the (1-51) n-terminal domain of the hiv-12 regulatory protein Resolution UNK

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		22	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	R	H	F	P	R	G	G	S	Y	A	D	I	H	H	A	L	I	E	E	G	Y	T	D	W	A	E	S	L	V	E	Y	A	W	K	K	W
Query Conservation
Alig confidence							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	R	H	F	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	I	W	L	H	S	L	G	Q	H	I	Y	E	T	Y
Template Known Secondary structure		T	T	S			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													T
Template Predicted Secondary structure							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		31	.	.	.	.																		.	.	.	.	40	.	.	.	.	.	.	.	.	.	50

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions