Job Description P39176 Confidence 99.97% Date Thu Jan 5 11:58:22 GMT 2012 Rank 3 Aligned Residues 118 % Identity 29% Template d1zata1 SCOP info L,D-transpeptidase catalytic domain-like L,D-transpeptidase catalytic domain-like L,D-transpeptidase catalytic domain-like Resolution 2.40

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		93	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	V	R	K	G	I	V	V	N	V	A	E	M	R	L	Y	Y	Y	P	P	D	S	N	T	V	E	V	F	P	I	G	I	G	Q	A	G	R	E	T	P	R	N	W	V	T	T	V	E	R	K	Q	E	A	P	T	W	T	P	T	P	N	T	R	R	E	Y	A	K	R	G	E	S	L	P	A	F	V	P	A	G
Query Conservation
Alig confidence																				.																											.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																				.																											.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	E	D	T	Y	I	E	V	D	L	E	N	Q	H	M	W	Y	Y	.	K	D	G	K	V	A	L	E	T	D	I	V	S	G	K	P	T	T	P	T	P	A	G	V	F	Y	.	V	W	N	K	E	E	D	A	T	L	K	G	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	G	T
Template Known Secondary structure				S							T	T	T	T						.		T	T									B		B		T	T	S									.												B		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																				.																											.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.		.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.		.	.	.	.	.	.	390	.	.	.	.	.	.																			.	.	.
		173	.	.	.	.	.	.	180	.	.	.	.	.		.	.	.	.	190	.	.	.	.	.	.	.	.	.	200						.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230
Predicted Secondary structure															.																.	.	.	.	.
Query SS confidence															.																.	.	.	.	.
Query Sequence		P	D	N	P	M	G	L	Y	A	I	Y	I	G	.	R	L	Y	A	I	H	G	T	N	A	N	F	G	I	G	.	.	.	.	.	L	R	V	S	Q	G	C	I	R	L	R	N	D	D	I	K	Y	L	F	D	N	V	P	V	G	T	R	V	Q	I
Query Conservation															.																.	.	.	.	.
Alig confidence															.																.	.	.	.	.
Template Conservation
Template Sequence		P	Y	E	S	P	V	N	Y	W	M	P	I	D	W	T	G	V	G	I	H	D	S	D	W	Q	P	E	Y	G	G	D	L	W	K	T	R	G	S	H	G	C	I	N	T	P	P	S	V	M	K	E	L	F	G	M	V	E	K	G	T	P	V	L	V
Template Known Secondary structure			B											S	S	S	S							T	T		S			S	T	T							B	S	S	S																	T	T
Template Predicted Secondary structure
Template SS confidence
		402	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions