Job Description P39176 Confidence 99.98% Date Thu Jan 5 11:58:22 GMT 2012 Rank 2 Aligned Residues 111 % Identity 36% Template d1y7ma1 SCOP info L,D-transpeptidase catalytic domain-like L,D-transpeptidase catalytic domain-like L,D-transpeptidase catalytic domain-like Resolution 2.05

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		91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170
Predicted Secondary structure
Query SS confidence
Query Sequence		P	D	T	V	R	K	G	I	V	V	N	V	A	E	M	R	L	Y	Y	Y	P	P	D	S	N	T	V	E	V	F	P	I	G	I	G	Q	A	G	R	E	T	P	R	N	W	V	T	T	V	E	R	K	Q	E	A	P	T	W	T	P	T	P	N	T	R	R	E	Y	A	K	R	G	E	S	L	P	A	F	V	P
Query Conservation
Alig confidence																						.																											.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																						.																											.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		P	Y	T	I	P	Y	H	I	A	V	S	I	G	A	K	T	L	T	L	S	.	L	N	N	R	V	X	K	T	Y	P	I	A	V	G	K	I	L	T	Q	T	P	T	G	E	F	Y	.	I	I	N	R	Q	R	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		G	G	G									T	T	T	T						.		T	T									B			B	T	T	B									.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																						.																											.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		51	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70		.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.		.	.	.	100	.	.	.
		171	.	.	.	.	.	.	.	.	180	.	.	.	.	.		.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230
Predicted Secondary structure																	.
Query SS confidence																	.
Query Sequence		A	G	P	D	N	P	M	G	L	Y	A	I	Y	I	G	.	R	L	Y	A	I	H	G	T	N	A	N	F	G	I	G	L	R	V	S	Q	G	C	I	R	L	R	N	D	D	I	K	Y	L	F	D	N	V	P	V	G	T	R	V	Q	I
Query Conservation																	.
Alig confidence		.	.														.
Template Conservation		.	.
Template Sequence		.	.	P	G	G	P	F	G	A	Y	W	L	S	L	S	A	A	H	Y	G	I	H	G	T	N	N	P	A	S	I	G	K	A	V	S	K	G	C	I	R	X	H	N	K	D	V	I	E	L	A	S	I	V	P	N	G	T	R	V	T	I
Template Known Secondary structure		.	.			G	G	G	T	T						S	S	T	T							S		G	G	G	T	T	S				S	S																		T	T
Template Predicted Secondary structure		.	.
Template SS confidence
				104	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions