 |
Job Description | P39176 | Confidence | 3.42% | Date | Thu Jan 5 11:58:22 GMT 2012 |
Rank | 50 | Aligned Residues | 37 |
% Identity | 19% | Template | c2ihfA_ |
PDB info |
PDB header:dna binding protein | Chain: A: PDB Molecule:single-stranded dna-binding protein; |
PDBTitle: crystal structure of deletion mutant delta 228-252 r190a of the2 single-stranded dna binding protein from thermus aquaticus
|
Resolution | 1.90 Å |
|
  |   |
208 | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . |
Predicted Secondary structure |   |
 |  |
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |
|
|  |  |
|
|
|
|
|
|
|  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
I | R | L | R | N | D | D | I | K | Y | L | F | D | N | V | P | V | G | T | R | V | Q | I | I | D | Q | P | V | K | Y | T | T | E | P | D | G | S |
Query Conservation |   |
|
|
|   |   |   |
|
|   |   |
|   |   |   |
|   |   |
|
|   |
|   |
|
|   |
|
|   |
|   |   |   |   |   |
|
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |   |
|   |   |
|
|   |   |   |   |   |
|   |
|
|   |   |
|   |
|   |
|   |
|   |   |   |   |   |
|   |
|
|   |
Template Sequence |   |
V | R | L | L | G | R | Q | A | E | M | W | G | D | L | L | E | K | G | Q | L | I | F | V | E | G | R | L | E | Y | R | Q | W | E | K | D | G | E |
Template Known Secondary structure |   |
 |  |  |  | T |  |  |  |  |  |  | T | T | T |
|
| T | T |
|  |  |  |  |  |  |  |  |  |  |  |  |
| S | S | S | S | S |
Template Predicted Secondary structure |   |
 |  |  |  |
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
56 | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|