Return to main results Retrieve Phyre Job Id

Job DescriptionP39176
Confidence95.04%DateThu Jan 5 11:58:22 GMT 2012
Rank9Aligned Residues77
% Identity16%Templatec2gu1A_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:zinc peptidase; PDBTitle: crystal structure of a zinc containing peptidase from2 vibrio cholerae
Resolution1.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3940.........50.........60.........70. ........80.........90.........100.........110....
Predicted Secondary structure 













....


























Query SS confidence 
































. . . .










































Query Sequence  TVTVPDHNTQPLETFAAQYGQGLSNMLEANPGA. . . . DVFLPKSGSQLTIPQQLILPDTVRKGIVVNVAEMRLYYYPPDS
Query Conservation     
    
  
  

         
  


  ....
      
  
 

    

      




 
 


 
   
Alig confidence 








..





















....
























.
















Template Conservation   
 

 


..
  

 
 

    
               
  

 
 
            .                 
Template Sequence  HYMVKVGDT. . LSGIFAQLGVPYSILQKILSVDLDHLQLDMIQPGEELELMMDDMGQLSRLI. YHMSIVEKAIYTRENDG
Template Known Secondary structure 

TT

..TT

GGGT

GGG

TT

TTS
.TT
TTS
Template Predicted Secondary structure 



..



















.








Template SS confidence 















































































   910....... ..20.........30.........40.........50.........60........ .70.........80.....
 
   115...
Predicted Secondary structure 
Query SS confidence 



Query Sequence  NTVE
Query Conservation    
 
Alig confidence 



Template Conservation      
Template Sequence  SFSY
Template Known Secondary structure 
Template Predicted Secondary structure 
Template SS confidence 



   86...
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions