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Job DescriptionP39176
Confidence100.00%DateThu Jan 5 11:58:22 GMT 2012
Rank1Aligned Residues161
% Identity32%Templatec1y7mB_
PDB info PDB header:structural genomics, unknown functionChain: B: PDB Molecule:hypothetical protein bsu14040; PDBTitle: crystal structure of the b. subtilis ykud protein at 2 a2 resolution
Resolution2.05 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   38.40.........50.........60.........70.........80.........90.........100.........110.......
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Query Sequence  FTVTVPDHNTQPLETFAAQYGQGLSNMLEANPGADVFLPKSGSQLTIPQQLILPDTVRKGIVVNVAEMRLYYYPPDSNTV
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Template Sequence  LTYQVKQGDT. . LNSIAADFRISTAALLQANPSLQAGL. TAGQSIVIPGLPDPYTIPYH. IAVSIGAKTLTLS. LNNRVX
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TT

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BTTBTTTS
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GGGS
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   2.......10. ........20.........30....... ..40.........50....... ..60.........70 ......
 
   118.120.........130.........140.........150.........160.........170.........180..... ....190......
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Query Sequence  EVFPIGIGQAGRETPRNWVTTVERKQEAPTWTPTPNTRREYAKRGESLPAFVPAGPDNPMGLYAIYIG. RLYAIHGTNAN
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Template Sequence  KTYPIAVGKILTQTPTGEF. YIINRQRN. . . . . . . . . . . . . . . . . . . . . . . . . . . PGGPFGAYWLSLSAAHYGIHGTNNP
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GGGTTSSTT


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   77..80.........90..... ....100... ......110.........120........
 
   197..200.........210.........220.........230.
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Query Sequence  FGIGLRVSQGCIRLRNDDIKYLFDNVPVGTRVQII
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Template Sequence  ASIGKAVSKGCIRXHNKDVIELASIVPNGTRVTIN
Template Known Secondary structure  GGTTSSS




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   129130.........140.........150.........160...
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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