Job Description P39176 Confidence 3.58% Date Thu Jan 5 11:58:22 GMT 2012 Rank 41 Aligned Residues 92 % Identity 13% Template c1tmoA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:trimethylamine n-oxide reductase; PDBTitle: trimethylamine n-oxide reductase from shewanella massilia Resolution 2.50 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		129	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.								.	180	.	.	.	.	.	.	.	.	.	190	.	.	.			.	.	.	.	.
Predicted Secondary structure																																																				.	.	.	.	.	.	.																.	.						.
Query SS confidence																																																				.	.	.	.	.	.	.																.	.						.
Query Sequence		R	E	T	P	R	N	W	V	T	T	V	E	R	K	Q	E	A	P	T	W	T	P	T	P	N	T	R	R	E	Y	A	K	R	G	E	S	L	P	A	F	V	P	A	G	P	D	N	P	M	G	.	.	.	.	.	.	.	L	Y	A	I	Y	I	G	R	L	Y	A	I	H	G	T	.	.	N	A	N	F	G	.
Query Conservation																																																				.	.	.	.	.	.	.																.	.						.
Alig confidence											.	.	.	.	.	.	.	.	.	.	.																															.	.	.	.	.	.	.																.	.						.
Template Conservation											.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	G	T	P	S	G	L	I	E	.	.	.	.	.	.	.	.	.	.	.	I	F	S	R	K	I	D	Q	F	G	Y	D	D	C	K	G	H	P	T	W	M	E	K	T	E	R	S	H	G	G	P	G	S	D	K	H	P	I	W	L	Q	S	C	H	P	D	K	R	L	H	S	Q	M	C	E	S	R	E	Y	R
Template Known Secondary structure			S	S	S	S	S	S			.	.	.	.	.	.	.	.	.	.	.	S	S						T	T			T	T	S		S	S							S	S		S	S	S	S	T	T	T	T	T											S	S	S	B	T	T	B	T	T	T
Template Predicted Secondary structure											.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		599	600	.	.	.	.	.	.	.												.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.
			199	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.
Predicted Secondary structure		.
Query SS confidence		.
Query Sequence		.	I	G	L	R	V	S	Q	G	C	I	R	L	R	N	D	D	I	K	Y	L	F	D	N	V	P	V	G	T	R	V	Q	I	I	D	Q
Query Conservation		.
Alig confidence		.																						.	.
Template Conservation																								.	.
Template Sequence		E	T	Y	A	V	N	G	R	E	P	V	Y	I	S	P	V	D	A	K	A	R	G	.	.	I	K	D	G	D	I	V	R	V	F	N	D
Template Known Secondary structure		T	T	T		B	T	T	B													T	T	.	.			T	T								S
Template Predicted Secondary structure																								.	.
Template SS confidence
		668	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.			690	.	.	.	.	.	.	.	.	.	700	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions