Job Description P69506 Confidence 12.77% Date Thu Jan 5 12:11:46 GMT 2012 Rank 79 Aligned Residues 112 % Identity 13% Template c3ccyA_ PDB info PDB header:transcription regulator Chain: A: PDB Molecule:putative tetr-family transcriptional regulator; PDBTitle: crystal structure of a tetr-family transcriptional regulator from2 bordetella parapertussis 12822 Resolution 2.01 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		17	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.																.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		R	A	S	A	L	F	R	K	Y	D	M	D	Y	C	C	G	G	K	Q	T	L	A	R	A	A	A	R	K	E	L	D	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	V	I	E	A	E	L	A	K	L	A	E	Q	P	I	E	K	D	W	R	S	A	P	L	A	E	I	I	D	H	I	I	V
Query Conservation																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence														.	.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation														.	.	.	.	.
Template Sequence		R	A	A	A	X	F	A	R	Q	G	Y	S	.	.	.	.	.	E	T	S	I	G	D	I	A	R	A	C	E	C	S	K	S	R	L	Y	H	Y	F	D	S	K	E	A	V	L	R	D	X	L	T	T	H	V	D	S	L	L	E	R	C	R	Q	V	L	Y	G	S	N	E	P	K	T	R	F	L	Q	I	V	K
Template Known Secondary structure										T		T	T	.	.	.	.	.	T	S									T	T			G	G	G	G	T	T	T		S																										T	T		S
Template Predicted Secondary structure														.	.	.	.	.
Template SS confidence
		19	20	.	.	.	.	.	.	.	.	.	30						.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	Y	H	D	R	H	R	E	Q	L	P	E	L	I	L	Q	A	T	K	V	E	R	V	H	A	D	K	P	S	V	P	K	G	L	T	K	Y	L	T	M	L	H	E	E	L	S	S	H	M	M	K	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	F	L	E	I	Y	A	T	S	R	D	R	H	V	V	X	L	T	C	L	D	A	L	P	E	D	Q	R	K	A	L	I	A	K	Q	R	E	L	I	A	Y	V	R	D	A	L	L	Q	L	R	P	D
Template Known Secondary structure																					G	G	G	S		S																										G	G
Template Predicted Secondary structure
Template SS confidence
		94	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions