Job Description P69506 Confidence 27.80% Date Thu Jan 5 12:11:46 GMT 2012 Rank 34 Aligned Residues 80 % Identity 16% Template c2l1lB_ PDB info PDB header:nuclear protein Chain: B: PDB Molecule:exportin-1; PDBTitle: nmr solution structure of the phi0 pki nes peptide in complex with2 crm1-rangtp Resolution UNK

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		50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.		.	.	120	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																						.
Query SS confidence																																																																						.
Query Sequence		V	I	E	A	E	L	A	K	L	A	E	Q	P	I	E	K	D	W	R	S	A	P	L	A	E	I	I	D	H	I	I	V	R	Y	H	D	R	H	R	E	Q	L	P	E	L	I	L	Q	A	T	K	V	E	R	V	H	A	D	K	P	S	V	P	K	G	L	T	K	.	Y	L	T	M	L	H	E	E	L	S	S
Query Conservation																																																																						.
Alig confidence																													.																																									.
Template Conservation																													.
Template Sequence		T	V	I	K	D	L	L	G	L	C	E	Q	K	R	G	K	D	N	K	A	I	I	A	S	N	I	M	.	Y	I	V	G	Q	Y	P	R	F	L	R	A	H	W	K	F	L	K	T	V	V	N	K	L	F	E	F	M	H	E	T	H	D	G	V	Q	D	M	A	C	D	T	F	I	K	I	A	Q	K	C	R	R
Template Known Secondary structure														S		S													.																												T	T			S	T	T																T	G	G
Template Predicted Secondary structure																													.
Template SS confidence
		519	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.		.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.
		129	130
Predicted Secondary structure
Query SS confidence
Query Sequence		H	M
Query Conservation
Alig confidence
Template Conservation
Template Sequence		H	F
Template Known Secondary structure		G	G
Template Predicted Secondary structure
Template SS confidence
		598	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions