Return to main results Retrieve Phyre Job Id

Job DescriptionP0AA41
Confidence100.00%DateThu Jan 5 11:11:52 GMT 2012
Rank4Aligned Residues219
% Identity34%Templated1v9ka_
SCOP infoPseudouridine synthase Pseudouridine synthase Pseudouridine synthase RsuA/RluD
Resolution2.00

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   4.....10.........20.........30.........40.........50.........60.........70.........80...
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Query Sequence  ILYQDEWLVAVNKPSGWLVHRSWLDRDEKVVVMQTVRDQIGQHVFTAHRLDRPTSGVLLMGLSSEAGRLLAQQFEQHQIQ
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Template Sequence  IXYEDDHILVLNKPSGTAVHGGSGLSFGVIEGLRALRPEA. RFLELVHRLDRDTSGVLLVAKKRSALRSLHEQLREKGXQ
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   95....100.........110.........120.........130.... .....140.........150.........160.........170...
 
   84.....90...... ...100.........110.........120.........130.........140.........150.........160..
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Query Sequence  KRYHAIVRGWLME. EAVLDYPLVEELDKIADKFAREDKGPQPAVTHYRGLATVEMPVATGRYPTTRYGLVELEPKTGRKH
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Template Sequence  KDYLALVRGQWQSHVKSVQAPLLKNILQSGERIVRVSQEGKPSETRFKVEER. . . . . . . . . . . YAFATLVRCSPVTGRTH
Template Known Secondary structure  S


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   174.....180.........190.........200.........210.........220..... ....230.........240..
 
   163......170.........180.........190.. .......200.........210.........220.........230....
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Query Sequence  QLRRHLAHLRHPIIGDSKHGDLRQNRSGAE. HFGLQRLMLHASQLSLTHPFTGEPLTIHAGLDDTWMQALSQF
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Template Sequence  QIRVHTQYAGHPIAFDDRYGDREFDRQLTEAGTGLNRLFLHAAALKFTHPGTGEVXRIEAPXDEGLKRCLQKX
Template Known Secondary structure  TT

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   243......250.........260.........270.........280.........290.........300.........310.....
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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