|   |
9 | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|  |  |  |  |  |
|
|
|
|  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
E | W | L | V | A | V | N | K | P | S | G | W | L | V | H | R | S | W | L | D | R | D | E | K | V | V | V | M | Q | T | V | R | D | Q | I | G | Q | H | V | F | T | A | H | R | L | D | R | P | T | S | G | V | L | L | M | G | L | S | S | E | A | G | R | L | L | A | Q | Q | F | E | Q | H | Q | I | Q | K | R | Y | H | A |
Query Conservation |   |
  |   |   |
|
|
|
|
|
|   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|
|
|
|   |   |
|
|
|
|
|
|
|
|
|   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |
|   |
|   |
|   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
Template Conservation |   |
  |
|
|
|   |
|   |
|
|   |
|   | . | . | . | . | . | . | . | . | . |
|
|   |   |
|
|   |   |
|
|
|   |   |   |   |
|
|
|
|
|   |
|
|
|
|
|   |
|
|
|
|
|
|
|   |
|
|   |
|
| . | . |
|
|   |   |   |
|   |   |   |   | . | . |
|   |
|   |
|
Template Sequence |   |
H | G | I | L | V | A | Y | K | P | K | G | P | . |
. |
. |
. |
. |
. |
. |
. |
. |
T | S | H | D | V | V | D | E | V | R | K | K | L | K | T | R | K | V | G | H | G | G | T | L | D | P | F | A | C | G | V | L | I | I | G | V | N | Q | G | T | . |
. |
R | I | L | E | F | Y | K | D | L | K | . |
. |
K | V | Y | W | V |
Template Known Secondary structure |   |
|  |  |  |  |  |  |  |
| S | S | S | . | . | . | . | . | . | . | . | . |
|  |  |  |  |  |  |  |  |  |  |  | T | T |
| S |
|  |  |  | S | S |
|
|
| T | T |
|  |  |  |  |  |  |  |  | G | G | G | G | . | . | G | G | G | G | G | G | T | T | S |
| . | . |  |  |  |  |  |
Template Predicted Secondary structure |   |
|  |  |  |  |  |  |
|
|
|
|
| . | . | . | . | . | . | . | . | . |
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|  |  | . | . |  |  |  |  |  |  |  |
|
|
| . | . |
|  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
12 | . | . | . | . | . | . | . | 20 | . | . | . | |
|
|
|
|
|
|
|
|
. | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | |
|
. | . | . | . | . | . | 70 | . | . | . | |
|
. | . | . | . | . |
  |
  |   |
89 | 90 |
Predicted Secondary structure |   |
 |  |
Query SS confidence |   |
|
|
Query Sequence |   |
I | V |
Query Conservation |   |
|
|
Alig confidence |   |
|
|
Template Conservation |   |
  |   |
Template Sequence |   |
K | M |
Template Known Secondary structure |   |
 |  |
Template Predicted Secondary structure |   |
 |  |
Template SS confidence |   |
|
|
  |   |
79 | 80 |
  |