Job Description P0AA41 Confidence 100.00% Date Thu Jan 5 11:11:52 GMT 2012 Rank 8 Aligned Residues 164 % Identity 19% Template c2omlA_ PDB info PDB header:isomerase Chain: A: PDB Molecule:ribosomal large subunit pseudouridine synthase e; PDBTitle: crystal structure of e. coli pseudouridine synthase rlue Resolution 1.20 Å

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		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	D	E	W	L	V	A	V	N	K	P	S	G	W	L	V	H	R	S	W	L	D	R	D	E	K	V	V	V	M	Q	T	V	R	D	Q	I	G	Q	H	V	F	T	A	H	R	L	D	R	P	T	S	G	V	L	L	M	G	L	S	S	E	A	G	R	L	L	A	Q	Q	F	E	Q	H	Q	I	Q	K	R	Y
Query Conservation
Alig confidence																																	.	.	.	.	.																																.	.
Template Conservation																																	.	.	.	.	.																																.	.
Template Sequence		Q	P	T	R	V	I	L	F	N	K	P	Y	D	V	L	P	Q	F	T	D	E	A	G	R	K	T	L	K	E	F	I	.	.	.	.	.	P	V	Q	G	V	Y	A	A	G	R	L	D	R	D	S	E	G	L	L	V	L	T	N	N	G	A	L	Q	A	R	L	.	.	T	Q	P	G	K	R	T	G	K	I	Y
Template Known Secondary structure													T	T	B		S		S	S			T	T		B		G	G	G	T		.	.	.	.	.			S	S				S	S				T	T									S									.	.		S	T	T	S
Template Predicted Secondary structure																																	.	.	.	.	.																																.	.
Template SS confidence
		37	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.						.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.			.	100	.	.	.	.	.	.	.	.	.
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.				.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
Predicted Secondary structure																		.	.	.
Query SS confidence																		.	.	.
Query Sequence		H	A	I	V	R	G	W	L	M	E	E	A	V	L	D	Y	.	.	.	P	L	V	E	E	L	D	K	I	A	D	K	F	A	R	E	D	K	G	P	Q	P	A	V	T	H	Y	R	G	L	A	T	V	E	M	P	V	A	T	G	R	Y	P	T	T	R	Y	G	L	V	E	L	E	P	K	T	G	R	K	H	Q
Query Conservation																		.	.	.
Alig confidence																		.	.	.																																	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																					.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Y	V	Q	V	E	G	I	P	T	Q	D	A	L	E	A	L	R	N	G	V	T	L	N	D	G	P	T	L	P	A	G	A	E	L	V	D	E	P	A	W	L	W	P	R	N	P	P	I	R	R	K	.	.	.	.	.	.	.	.	.	.	.	S	I	P	T	S	W	L	K	I	T	L	Y	E	G	R	N	R	Q
Template Known Secondary structure							S																	T	T															T	T					S	S					T	.	.	.	.	.	.	.	.	.	.	.	T	S										S				T	T
Template Predicted Secondary structure																																																					.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160												.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.
		164	.	.	.	.	.	170	.	.	.	.	.			.	.	.	.	180	.	.	.	.	.	.	.	.
Predicted Secondary structure														.	.
Query SS confidence														.	.
Query Sequence		L	R	R	H	L	A	H	L	R	H	P	I	.	.	I	G	D	S	K	H	G	D	L	R	Q	N	R
Query Conservation														.	.
Alig confidence														.	.
Template Conservation
Template Sequence		V	R	R	M	T	A	H	V	G	F	P	T	L	R	L	I	R	Y	A	M	G	D	Y	S	L	D	N
Template Known Secondary structure									T	T												T	T				T	T
Template Predicted Secondary structure
Template SS confidence
		180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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