Job Description P0AA41 Confidence 97.04% Date Thu Jan 5 11:11:52 GMT 2012 Rank 21 Aligned Residues 70 % Identity 21% Template c2apoA_ PDB info PDB header:isomerase/rna binding protein Chain: A: PDB Molecule:probable trna pseudouridine synthase b; PDBTitle: crystal structure of the methanococcus jannaschii cbf52 nop10 complex Resolution 1.95 Å

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		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	W	L	V	A	V	N	K	P	S	G	W	L	V	H	R	S	W	L	D	R	D	E	K	V	V	V	M	Q	T	V	R	D	Q	I	G	Q	H	V	F	T	A	H	R	L	D	R	P	T	S	G	V	L	L	M	G	L	S	S	E	A	G	R	L	L	A	Q	Q	F	E	Q	H	Q	I	Q	K	R	Y	H	A
Query Conservation
Alig confidence														.	.	.	.	.	.	.	.	.																																								.	.												.	.
Template Conservation														.	.	.	.	.	.	.	.	.																																								.	.												.	.
Template Sequence		Y	G	V	V	V	V	D	K	P	R	G	P	.	.	.	.	.	.	.	.	.	T	S	H	E	V	S	T	W	V	K	K	I	L	N	L	D	K	A	G	H	G	G	T	L	D	P	K	V	T	G	V	L	P	V	A	L	E	R	A	.	.	T	K	T	I	P	M	W	H	I	P	P	.	.	K	E	Y	V	C
Template Known Secondary structure		T									S	S	S	.	.	.	.	.	.	.	.	.													T	T		S					S	S				T	T										G	G	G	.	.	G	G	G	G	G	G	T	T	S	S		.	.
Template Predicted Secondary structure														.	.	.	.	.	.	.	.	.																																								.	.												.	.
Template SS confidence
		45	.	.	.	.	50	.	.	.	.	.	.										.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.			.	.	.	.	100	.	.	.	.	.	.			.	.	.	110	.
		89	90	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	V	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	M	H
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		112	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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