Job Description P0AA41 Confidence 96.60% Date Thu Jan 5 11:11:52 GMT 2012 Rank 23 Aligned Residues 70 % Identity 27% Template c1sgvA_ PDB info PDB header:lyase Chain: A: PDB Molecule:trna pseudouridine synthase b; PDBTitle: structure of trna psi55 pseudouridine synthase (trub) Resolution 1.90 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	E	W	L	V	A	V	N	K	P	S	G	W	L	V	H	R	S	W	L	D	R	D	E	K	V	V	V	M	Q	T	V	R	D	Q	I	G	Q	H	V	F	T	A	H	R	L	D	R	P	T	S	G	V	L	L	M	G	L	S	S	E	A	G	R	L	L	A	Q	Q	F	E	Q	H	Q	I	Q	K	R	Y	H
Query Conservation
Alig confidence															.	.	.	.	.	.	.	.	.																																					.	.															.	.
Template Conservation															.	.	.	.	.	.	.	.	.																																					.	.															.	.
Template Sequence		G	P	G	I	V	V	I	D	K	P	A	G	M	.	.	.	.	.	.	.	.	.	T	S	H	D	V	V	G	R	C	R	R	I	F	A	T	R	R	V	G	H	A	G	T	L	D	P	M	A	T	G	V	L	V	I	G	I	.	.	E	R	A	T	K	I	L	G	L	L	T	A	A	P	.	.	K	S	Y	A
Template Known Secondary structure			S									T	T		.	.	.	.	.	.	.	.	.													T	T		S					S	S				T	T										.	.	G	G	G	G	G	G	G	G	G	T	T	T	S		.	.
Template Predicted Secondary structure															.	.	.	.	.	.	.	.	.																																					.	.															.	.
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.										.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.			.	.	.	.	.	.	60	.	.	.	.	.	.	.			.	.	70	.
		88	.	90
Predicted Secondary structure
Query SS confidence
Query Sequence		A	I	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	T	I
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		72	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions