Return to main results Retrieve Phyre Job Id

Job DescriptionP64548
Confidence3.88%DateThu Jan 5 12:09:21 GMT 2012
Rank59Aligned Residues44
% Identity7%Templatec3ts3D_
PDB info PDB header:viral proteinChain: D: PDB Molecule:capsid polyprotein; PDBTitle: crystal structure of the projection domain of the turkey astrovirus2 capsid protein at 1.5 angstrom resolution
Resolution1.49 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   102.......110.........120.........130.........140.......
Predicted Secondary structure 













Query SS confidence 













































Query Sequence  PTFQMELTEQYPSKALLLIAEQNTECIIGSAFCLIIHNNDVRFAVN
Query Conservation        

  
   






   
   

 
 
     



 

Alig confidence 























..



















Template Conservation    
 
 



 
 


 
 


 
..

 








  
   
 
Template Sequence  DEQLKQRLNLAEGDPVISMGDTNG. . RRAALFYRTSDEKYILFFST
Template Known Secondary structure 
T

TT
TT
..
TTTT
Template Predicted Secondary structure 











..




Template SS confidence 













































   550.........560.........570... ......580.........590...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions