 |
Job Description | P64548 | Confidence | 3.88% | Date | Thu Jan 5 12:09:21 GMT 2012 |
Rank | 59 | Aligned Residues | 44 |
% Identity | 7% | Template | c3ts3D_ |
PDB info |
PDB header:viral protein | Chain: D: PDB Molecule:capsid polyprotein; |
PDBTitle: crystal structure of the projection domain of the turkey astrovirus2 capsid protein at 1.5 angstrom resolution
|
Resolution | 1.49 Å |
|
  |   |
102 | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |
|
|  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
P | T | F | Q | M | E | L | T | E | Q | Y | P | S | K | A | L | L | L | I | A | E | Q | N | T | E | C | I | I | G | S | A | F | C | L | I | I | H | N | N | D | V | R | F | A | V | N |
Query Conservation |   |
  |   |   |   |   |   |
|
|   |   |
|   |   |   |
|
|
|
|
|
|
|   |   |   |
|   |   |   |
|
|   |
|   |
|   |   |   |   |   |
|
|
|
|   |
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|   |
|   |
|
|
|
|   |
|   |
|
|
|   |
|   |
|
|
|   |
| . | . |
|
|   |
|
|
|
|
|
|
|
|
|   |   |
|   |   |   |
|   |
Template Sequence |   |
D | E | Q | L | K | Q | R | L | N | L | A | E | G | D | P | V | I | S | M | G | D | T | N | G | . |
. |
R | R | A | A | L | F | Y | R | T | S | D | E | K | Y | I | L | F | F | S | T |
Template Known Secondary structure |   |
|  |  |  |  |  |  |  | T |
|
| T | T |
|  |  |  |  |  |  |  | T | T |
| . | . |
|  |  |  |  |  |  |  | T | T | T | T |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
| . | . |
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
550 | . | . | . | . | . | . | . | . | . | 560 | . | . | . | . | . | . | . | . | . | 570 | . | . | . | |
|
. | . | . | . | . | . | 580 | . | . | . | . | . | . | . | . | . | 590 | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|