Job Description P0AF43 Confidence 32.41% Date Thu Jan 5 11:25:06 GMT 2012 Rank 21 Aligned Residues 117 % Identity 9% Template d1i5na_ SCOP info Four-helical up-and-down bundle Histidine-containing phosphotransfer domain, HPT domain Chemotaxis protein CheA P1 domain Resolution 2.14

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		367	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.							410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440
Predicted Secondary structure																																													.	.	.	.	.	.
Query SS confidence																																													.	.	.	.	.	.
Query Sequence		L	R	K	L	A	D	D	I	N	V	L	Y	T	A	I	K	L	Y	L	A	R	M	P	K	E	E	L	A	E	E	E	S	R	R	W	A	E	I	I	E	M	S	L	.	.	.	.	.	.	N	L	E	Q	A	S	D	I	V	E	R	M	G	S	E	I	A	D	K	S	L	A	A	R	R	A	F	S	L	D	G
Query Conservation																																													.	.	.	.	.	.
Alig confidence																																													.	.	.	.	.	.													.																	.	.
Template Conservation																																																															.																	.	.
Template Sequence		Y	Q	T	F	F	D	E	A	D	E	L	L	A	D	X	E	Q	H	L	L	D	L	V	P	E	S	P	D	A	E	Q	L	N	A	I	F	R	A	A	H	S	I	K	G	G	A	G	T	F	G	F	T	I	L	Q	E	T	T	H	L	X	.	E	N	L	L	D	E	A	R	R	G	E	X	Q	L	N	T	.	.
Template Known Secondary structure																									T	T	S																							T	T												.									T	T	S	S					.	.
Template Predicted Secondary structure																																																															.																	.	.
Template SS confidence
		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.		70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
		441	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	K	E	L	D	A	L	Y	E	Q	L	L	S	N	L	K	L	A	M	S	V	F	F	S	G	D	V	T	S	A	R	R	L	R	R	S	K	H	R	F	R	I	L	N	R	R	Y	S
Query Conservation
Alig confidence		.	.
Template Conservation		.	.
Template Sequence		.	.	D	I	I	N	L	F	L	E	T	K	D	I	X	Q	E	Q	L	D	A	Y	K	N	S	E	E	P	D	A	A	S	F	E	Y	I	C	N	A	L	R	Q	L	A	L	E	A	K
Template Known Secondary structure		.	.																						T	T
Template Predicted Secondary structure		.	.
Template SS confidence
				86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions