Job Description P0AF43 Confidence 25.78% Date Thu Jan 5 11:25:06 GMT 2012 Rank 38 Aligned Residues 119 % Identity 11% Template d1eq1a_ SCOP info Apolipophorin-III Apolipophorin-III Apolipophorin-III Resolution UNK

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		369	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.		.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.
Predicted Secondary structure																									.
Query SS confidence																									.
Query Sequence		K	L	A	D	D	I	N	V	L	Y	T	A	I	K	L	Y	L	A	R	M	P	K	E	.	E	L	A	E	E	E	S	R	R	W	A	E	I	I	E	M	S	L	N	L	E	Q	A	S	D	I	V	E	R	M	G	S	E	I	A	D	K	S	L	A	A	R	R	A	F	S	L	D	G	L	K	E	L	D	A	L
Query Conservation																									.
Alig confidence																									.													.	.																							.	.	.	.
Template Conservation																																						.	.																							.	.	.	.
Template Sequence		A	L	K	D	G	S	D	S	V	L	Q	Q	L	S	A	F	S	S	S	L	Q	G	A	I	S	D	A	N	G	K	A	K	E	A	L	E	.	.	Q	A	R	Q	N	V	E	K	T	A	E	E	L	R	K	A	H	P	D	V	E	K	.	.	.	.	E	A	N	A	F	K	D	K	L	Q	A	A	V	Q	T	T
Template Known Secondary structure																										T	T		S	S	T							.	.												G	G	G	G		S						.	.	.	.	T		S	S	S
Template Predicted Secondary structure																																						.	.																							.	.	.	.
Template SS confidence
		42	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.			.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.					100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.
		448	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	E	Q	L	L	S	N	L	K	L	A	M	S	V	F	F	S	G	D	V	T	S	A	R	R	L	R	R	S	K	H	R	F	R	I	L	N	R	R	Y	S	H	A	H	V	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	Q	E	S	Q	K	L	A	K	E	V	A	S	N	M	E	E	T	N	K	K	L	A	P	K	I	K	Q	A	Y	D	D	F	V	K	H	A	E	E	V	Q	K	K	L	H	E
Template Known Secondary structure														S				S	S		G	G	G
Template Predicted Secondary structure
Template SS confidence
		116	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions