Job Description P0AF43 Confidence 32.09% Date Thu Jan 5 11:25:06 GMT 2012 Rank 22 Aligned Residues 113 % Identity 12% Template c3t6gB_ PDB info PDB header:signaling protein, cell adhesion Chain: B: PDB Molecule:breast cancer anti-estrogen resistance protein 1; PDBTitle: structure of the complex between nsp3 (shep1) and p130cas Resolution 2.50 Å

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		368	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	K	L	A	D	D	I	N	V	L	Y	T	A	I	K	L	Y	L	A	R	M	P	K	E	E	L	A	E	E	E	S	R	R	W	A	E	I	I	E	M	S	L	N	L	E	Q	A	S	D	I	V	E	R	M	G	S	E	I	A	D	K	S	L	A	A	R	R	A	F	S	L	D	G	L	K	E	L	D	A	L
Query Conservation
Alig confidence																																																											.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																											.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	Q	C	E	A	N	L	T	T	L	T	N	A	V	D	A	F	F	T	A	V	A	T	N	Q	P	P	K	I	F	V	A	H	S	K	F	V	I	L	S	A	H	K	L	V	F	I	G	D	T	L	S	R	Q	A	K	A	.	.	.	.	.	.	.	.	.	.	.	.	.	A	D	V	R	S	Q	V	T	H	Y
Template Known Secondary structure																								T	T																														S			S	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																											.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		749	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.														.	.	.	.	810	.	.	.	.	.
		448	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.						.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.
Predicted Secondary structure																		.	.	.	.	.
Query SS confidence																		.	.	.	.	.
Query Sequence		Y	E	Q	L	L	S	N	L	K	L	A	M	S	V	F	F	.	.	.	.	.	S	G	D	V	T	S	A	R	R	L	R	R	S	K	H	R	F	R	I	L	N	R	R	Y	S	H	A	H	V	D
Query Conservation																		.	.	.	.	.
Alig confidence																		.	.	.	.	.
Template Conservation
Template Sequence		S	N	L	L	C	D	L	L	R	G	I	V	A	T	T	K	A	A	A	L	Q	Y	P	S	P	S	A	A	Q	D	M	V	E	R	V	K	E	L	G	H	S	T	Q	Q	F	R	R	V	L	G	Q
Template Known Secondary structure																						T		S
Template Predicted Secondary structure
Template SS confidence
		816	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions