Job Description P0AF43 Confidence 29.96% Date Thu Jan 5 11:25:06 GMT 2012 Rank 25 Aligned Residues 130 % Identity 13% Template c3p5nA_ PDB info PDB header:transport protein Chain: A: PDB Molecule:riboflavin uptake protein; PDBTitle: structure and mechanism of the s component of a bacterial ecf2 transporter Resolution 3.60 Å

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		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	V	Q	V	I	F	A	S	L	T	G	D	I	L	L	D	A	L	I	G	A	M	F	A	I	I	S	Y	S	S	L	A	A	V	L	L	T	A	T	L	T	A	A	G	I	I	S	F	P	V	A	L	C	L	V	I	G	A	N	L	G	S	G	L	L	A	M	L	N	N	S	A	A	N	A	A	A	R	R	V
Query Conservation
Alig confidence																								.	.	.	.	.	.	.	.	.	.	.	.																								.	.	.
Template Conservation																								.	.	.	.	.	.	.	.	.	.	.	.																								.	.	.
Template Sequence		D	V	P	S	L	L	A	T	F	T	F	G	P	V	A	G	I	I	V	A	L	V	.	.	.	.	.	.	.	.	.	.	.	.	K	N	L	L	N	Y	L	F	S	M	G	D	P	V	G	P	F	A	N	F	L	A	G	.	.	.	A	S	F	L	L	T	A	Y	A	I	Y	K	N	K	R	S	T	K	S	L
Template Known Secondary structure		G								T	T	S												.	.	.	.	.	.	.	.	.	.	.	.									T	T	T		S	S										.	.	.												S	S	S		S
Template Predicted Secondary structure																								.	.	.	.	.	.	.	.	.	.	.	.																								.	.	.
Template SS confidence
		48	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.													70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.				.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.
		239	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	L	G	S	L	L	F	K	L	V	G	S	L	I	I	L	P	F	V	H	L	L	A	E	T	M	G	K	L	S	L	P	K	A	E	L	V	I	Y	F	H	V	F	Y	N	L	V	R	C	L	V	M	L	P	F	V	D	P	M	A	R	F	C	K	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	T	G	L	I	I	A	T	I	V	M	T	I	V	L	S	I	L	N	Y	F	V	L	L	P	L	Y	G	M	K	V	I	I	V	S	G	I	I	P	F	N	I	I	K	G	I	V	I	S	I	V	F	I	L	L	Y	R	R	L	A	N	F	L	K	R
Template Known Secondary structure																					T	T	T	T	T																																		T	T					T
Template Predicted Secondary structure
Template SS confidence
		113	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions