Job Description P0AF43 Confidence 17.53% Date Thu Jan 5 11:25:06 GMT 2012 Rank 79 Aligned Residues 79 % Identity 14% Template c3bt6B_ PDB info PDB header:viral protein Chain: B: PDB Molecule:influenza b hemagglutinin (ha); PDBTitle: crystal structure of influenza b virus hemagglutinin Resolution 2.80 Å

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		412	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.							.	.	.	480	.	.	.	.	.
Predicted Secondary structure																																																																			.	.	.	.	.	.
Query SS confidence																																																																			.	.	.	.	.	.
Query Sequence		E	Q	A	S	D	I	V	E	R	M	G	S	E	I	A	D	K	S	L	A	A	R	R	A	F	S	L	D	G	L	K	E	L	D	A	L	Y	E	Q	L	L	S	N	L	K	L	A	M	S	V	F	F	S	G	D	V	T	S	A	R	R	L	R	R	S	.	.	.	.	.	.	K	H	R	F	R	I	L	N	R
Query Conservation																																																																			.	.	.	.	.	.
Alig confidence																														.																																					.	.	.	.	.	.
Template Conservation																														.
Template Sequence		Q	E	A	I	N	K	I	T	K	N	L	N	S	L	S	E	L	E	V	K	N	L	Q	R	L	S	G	A	.	M	D	E	L	H	N	E	I	L	E	L	D	E	K	V	D	D	L	R	A	D	T	I	S	S	Q	I	E	L	A	V	L	L	S	N	E	G	I	I	N	S	E	D	E	H	L	L	A	L	E	R
Template Known Secondary structure																											T	T		.		T	T	T
Template Predicted Secondary structure																														.
Template SS confidence
		42	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.		70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120
		486	.	.	.	490	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	Y	S	H	A	H
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	L	K	K	M	L
Template Known Secondary structure							T
Template Predicted Secondary structure
Template SS confidence
		121	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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