Job Description P0AF43 Confidence 22.08% Date Thu Jan 5 11:25:06 GMT 2012 Rank 49 Aligned Residues 79 % Identity 10% Template c2wr2B_ PDB info PDB header:viral protein Chain: B: PDB Molecule:hemagglutinin; PDBTitle: structure of influenza h2 avian hemagglutinin with avian2 receptor Resolution 2.40 Å

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		412	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.							.	.	.	480	.	.	.	.	.
Predicted Secondary structure																																																																			.	.	.	.	.	.
Query SS confidence																																																																			.	.	.	.	.	.
Query Sequence		E	Q	A	S	D	I	V	E	R	M	G	S	E	I	A	D	K	S	L	A	A	R	R	A	F	S	L	D	G	L	K	E	L	D	A	L	Y	E	Q	L	L	S	N	L	K	L	A	M	S	V	F	F	S	G	D	V	T	S	A	R	R	L	R	R	S	.	.	.	.	.	.	K	H	R	F	R	I	L	N	R
Query Conservation																																																																			.	.	.	.	.	.
Alig confidence																														.																																					.	.	.	.	.	.
Template Conservation																														.
Template Sequence		Q	K	A	F	D	G	I	T	N	K	V	N	S	V	I	E	K	M	N	T	Q	F	E	A	V	G	K	E	.	F	S	N	L	E	R	R	L	E	N	L	N	K	K	M	E	D	G	F	L	D	V	W	T	Y	N	A	E	L	L	V	L	M	E	N	E	R	T	L	D	F	H	D	S	N	V	K	N	L	Y	D
Template Known Secondary structure																		T												.			T	T
Template Predicted Secondary structure																														.
Template SS confidence
		371	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.		.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.
		486	.	.	.	490	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	Y	S	H	A	H
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	V	R	M	Q	L
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		450	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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