Job Description P0AF43 Confidence 25.88% Date Thu Jan 5 11:25:06 GMT 2012 Rank 37 Aligned Residues 147 % Identity 9% Template c2qrxA_ PDB info PDB header:dna binding protein Chain: A: PDB Molecule:gm27569p; PDBTitle: crystal structure of drosophila melanogaster translin2 protein Resolution 3.60 Å

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		331	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410
Predicted Secondary structure
Query SS confidence
Query Sequence		A	L	A	N	A	A	R	E	T	L	R	I	G	D	A	M	E	Q	M	M	E	G	L	N	K	V	M	H	G	E	P	R	Q	E	K	E	L	R	K	L	A	D	D	I	N	V	L	Y	T	A	I	K	L	Y	L	A	R	M	P	K	E	E	L	A	E	E	E	S	R	R	W	A	E	I	I	E	M	S	L	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	E	Q	E	V	R	E	N	I	R	I	V	V	R	E	I	E	H	L	S	K	E	A	Q	I	K	L	Q	I	I	H	S	D	L	S	Q	I	S	A	A	C	G	L	A	R	K	Q	V	E	L	C	A	Q	K	Y	Q	K	L	A	E	L	V	P	A	G	Q	Y	Y	R	Y	S	D	H	W	T	F	I	T	Q	R
Template Known Secondary structure																												T	T	G	G	G	T		G	G	G															T	T	T									S		T	T						T	T	T	T	S
Template Predicted Secondary structure
Template SS confidence
		19	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.
		411	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.																			.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.
Predicted Secondary structure																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	E	Q	A	S	D	I	V	E	R	M	G	S	E	I	A	D	K	S	L	A	A	R	R	A	F	S	L	D	G	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	E	L	D	A	L	Y	E	Q	L	L	S	N	L	K	L	A	M	S	V	F	F	S	G	D	V	T	S	A	R	R
Query Conservation																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence			.	.	.	.	.	.						.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation			.	.	.	.	.	.						.	.
Template Sequence		L	.	.	.	.	.	.	I	F	I	I	A	.	.	L	V	I	Y	L	E	A	G	F	L	V	T	R	E	T	V	A	E	M	L	G	L	K	I	S	Q	S	E	G	F	H	L	D	V	E	D	Y	L	L	G	I	L	Q	L	A	S	E	L	S	R	F	A	T	N	S	V	T	M	G	D	Y	E	R	S	L	N
Template Known Secondary structure			.	.	.	.	.	.						.	.								S	S												T		B	S	S	G	G	G	S	S	B																											T	T
Template Predicted Secondary structure			.	.	.	.	.	.						.	.
Template SS confidence
		99							100	.	.	.	.			.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170
		473	.	.	.	.	.	.	480	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	R	R	S	K	H	R	F	R	I	L	N	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	S	H	F	I	G	D	L	N	T	G	F	R
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		171	.	.	.	.	.	.	.	.	180	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions