Job Description P0AF43 Confidence 25.67% Date Thu Jan 5 11:25:06 GMT 2012 Rank 39 Aligned Residues 152 % Identity 5% Template c2qr4B_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:peptidase m3b, oligoendopeptidase f; PDBTitle: crystal structure of oligoendopeptidase-f from enterococcus faecium Resolution 2.50 Å

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		368	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.		.	.	.	.	.	440	.	.	.	.	.	.
Predicted Secondary structure																																																																					.
Query SS confidence																																																																					.
Query Sequence		R	K	L	A	D	D	I	N	V	L	Y	T	A	I	K	L	Y	L	A	R	M	P	K	E	E	L	A	E	E	E	S	R	R	W	A	E	I	I	E	M	S	L	N	L	E	Q	A	S	D	I	V	E	R	M	G	S	E	I	A	D	K	S	L	A	A	R	R	.	A	F	S	L	D	G	L	K	E	L	D	A
Query Conservation																																																																					.
Alig confidence																																.	.	.	.	.	.																																.
Template Conservation																																.	.	.	.	.	.
Template Sequence		Q	E	F	D	E	K	Y	L	E	L	S	E	E	L	K	Q	S	E	K	H	K	G	T	L	D	Q	G	A	S	Q	.	.	.	.	.	.	F	L	N	A	I	E	F	V	L	R	V	Y	R	Q	T	E	V	I	Y	V	Y	A	H	L	K	N	D	Q	D	T	G	N	T	D	Y	Q	A	L	Y	A	R	A	S	S
Template Known Secondary structure															G	G	G	S	T	T	T	T	T		T	T	S					.	.	.	.	.	.																													S	T	T
Template Predicted Secondary structure																																.	.	.	.	.	.
Template SS confidence
		28	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.							.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.
		447	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	Y	E	Q	L	L	S	N	L	K	L	A	M	S	V	F	F	S	G	D	V	T	S	A	R	R	L	R	R	S	K	H	R	F	R	I	L	N	R	R	Y	S	H	A	H	V	D	R	L	H	Q	Q	N	V	Q	S	I	E	T	S	S	L	H	L	G	L	L	G	D	M	Q	R	L	N	S	L	F	C	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	F	S	K	V	S	E	A	V	S	W	F	E	P	E	I	L	Q	L	S	D	D	Q	I	W	Q	Y	F	K	E	E	P	K	L	E	V	Y	R	H	Y	I	Q	Q	I	V	D	N	R	A	H	V	L	S	A	E	Q	E	S	L	L	A	G	A	G	E	I	F	D	A	S	S	D	T	F	A	V	L	N	N
Template Known Secondary structure										T	T	T						T	T	S													G	G	G	G	G	G									T	T	G	G	G													T
Template Predicted Secondary structure
Template SS confidence
		102	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions