Job Description P0AF43 Confidence 18.46% Date Thu Jan 5 11:25:06 GMT 2012 Rank 66 Aligned Residues 83 % Identity 6% Template c2c5iT_ PDB info PDB header:protein transport Chain: T: PDB Molecule:t-snare affecting a late golgi compartment PDBTitle: n-terminal domain of tlg1 complexed with n-terminus of2 vps51 in distorted conformation Resolution 2.3 Å

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		411	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Predicted Secondary structure
Query SS confidence
Query Sequence		L	E	Q	A	S	D	I	V	E	R	M	G	S	E	I	A	D	K	S	L	A	A	R	R	A	F	S	L	D	G	L	K	E	L	D	A	L	Y	E	Q	L	L	S	N	L	K	L	A	M	S	V	F	F	S	G	D	V	T	S	A	R	R	L	R	R	S	K	H	R	F	R	I	L	N	R	R	Y	S	H	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	Q	Q	V	V	K	D	T	K	E	Q	L	N	R	I	N	N	Y	I	T	R	H	N	T	A	G	D	D	D	Q	E	E	E	I	Q	D	I	L	K	D	V	E	E	T	I	V	D	L	D	R	S	I	I	V	X	K	R	D	E	N	E	D	V	S	G	R	E	A	Q	V	K	N	I	K	Q	Q	L	D	A	L
Template Known Secondary structure																							T		S																															T	T	T		S	S
Template Predicted Secondary structure
Template SS confidence
		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
		491	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	V	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	L	R
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		88	.	90

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions