Job Description P0AF43 Confidence 23.95% Date Thu Jan 5 11:25:06 GMT 2012 Rank 41 Aligned Residues 79 % Identity 10% Template c1ha0A_ PDB info PDB header:viral protein Chain: A: PDB Molecule:protein (hemagglutinin precursor); PDBTitle: hemagglutinin precursor ha0 Resolution 2.80 Å

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		412	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.							.	.	.	480	.	.	.	.	.
Predicted Secondary structure																																																																			.	.	.	.	.	.
Query SS confidence																																																																			.	.	.	.	.	.
Query Sequence		E	Q	A	S	D	I	V	E	R	M	G	S	E	I	A	D	K	S	L	A	A	R	R	A	F	S	L	D	G	L	K	E	L	D	A	L	Y	E	Q	L	L	S	N	L	K	L	A	M	S	V	F	F	S	G	D	V	T	S	A	R	R	L	R	R	S	.	.	.	.	.	.	K	H	R	F	R	I	L	N	R
Query Conservation																																																																			.	.	.	.	.	.
Alig confidence																														.																																					.	.	.	.	.	.
Template Conservation																														.
Template Sequence		Q	A	A	I	D	Q	I	N	G	K	L	N	R	V	I	E	K	T	N	E	K	F	H	Q	I	E	K	E	.	F	S	E	V	E	G	R	I	Q	D	L	E	K	Y	V	E	D	T	K	I	D	L	W	S	Y	N	A	E	L	L	V	A	L	E	N	Q	H	T	I	D	L	T	D	S	E	M	N	K	L	F	E
Template Known Secondary structure																T								S						.		S	S
Template Predicted Secondary structure																														.
Template SS confidence
		371	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.		.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.
		486	.	.	.	490	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	Y	S	H	A	H
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	T	R	R	Q	L
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		450	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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