Job Description Q46807 Confidence 100.00% Date Thu Jan 5 12:34:33 GMT 2012 Rank 26 Aligned Residues 228 % Identity 21% Template c3ll5C_ PDB info PDB header:transferase Chain: C: PDB Molecule:gamma-glutamyl kinase related protein; PDBTitle: crystal structure of t. acidophilum isopentenyl phosphate kinase2 product complex Resolution 1.99 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	K	I	V	L	A	L	G	G	N	A	L	G	D	D	L	A	G	Q	M	K	A	V	K	I	T	S	Q	A	I	V	D	L	I	A	Q	G	H	E	V	I	V	T	H	G	N	G	P	Q	V	G	M	I	N	Q	A	F	E	A	A	A	K	T	E	A	H	S	P	M	L	P	M	S	V	C	V	A	L	S	Q
Query Conservation
Alig confidence																																																																			.	.	.	.	.	.
Template Conservation																																																																			.	.	.	.	.	.
Template Sequence		T	X	X	I	L	K	I	G	G	S	V	I	T	D	K	S	A	Y	R	T	A	R	T	Y	A	I	R	S	I	V	K	V	L	S	G	I	E	D	L	V	C	V	V	H	G	G	G	S	F	G	H	I	K	A	X	E	F	G	L	P	G	P	K	N	P	.	.	.	.	.	.	R	S	S	I	G	Y	S	I	V
Template Known Secondary structure														B		S		S	S		S	B													T	T		T	T																			T	T		S						.	.	.	.	.	.
Template Predicted Secondary structure																																																																			.	.	.	.	.	.
Template SS confidence
		0	.	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.							.	.	.	.	.	70	.	.	.
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	Y	I	G	Y	D	L	Q	N	A	L	R	E	E	L	L	S	R	G	I	N	K	P	V	A	T	L	V	T	Q	V	E	V	D	A	N	D	P	A	F	L	N	P	T	K	P	I	G	S	F	F	T	E	Q	E	A	E	Q	L	T	K	Q	G	Y	T	L	K	E	D	A	G	R	G	Y	R	R	V	V	A	S
Query Conservation
Alig confidence																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		H	R	D	X	E	N	L	D	L	X	V	I	D	A	X	I	E	X	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	X	R	P	I	S	V	P	I	S	A
Template Known Secondary structure																			T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								G	G	G
Template Predicted Secondary structure																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		74	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.																																																				.	.	.	.	.	.	.	100	.	.
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
Predicted Secondary structure																																																																																	.
Query SS confidence																																																																																	.
Query Sequence		P	K	P	V	D	I	I	E	K	E	T	V	K	A	L	V	D	A	G	Q	V	V	I	T	V	G	G	G	G	I	P	V	I	R	E	G	N	H	L	R	G	A	S	A	V	I	D	K	D	W	A	S	A	R	L	A	E	M	I	D	A	D	M	L	I	I	L	T	A	V	E	K	V	A	I	N	F	G	K	.
Query Conservation																																																																																	.
Alig confidence																																.	.	.	.	.	.	.																																											.
Template Conservation																																.	.	.	.	.	.	.
Template Sequence		L	R	Y	D	G	R	F	D	Y	T	P	L	I	R	Y	I	D	A	G	F	V	P	V	S	Y	G	D	V	Y	I	.	.	.	.	.	.	.	K	D	E	H	S	Y	G	I	Y	S	G	D	D	I	X	A	D	X	A	E	L	L	K	P	D	V	A	V	F	L	T	D	V	D	G	I	Y	S	K	D	P	K	R
Template Known Secondary structure		S		B	S	S	S	B											T	T												.	.	.	.	.	.	.			T	T																					S							S	S	S	S		B	S	S		T	T	T
Template Predicted Secondary structure																																.	.	.	.	.	.	.
Template SS confidence
		103	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.								.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.
			242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290			.	.	.	.	.	.	.	.	.	300	.	.	.		.	.	.	.	.
Predicted Secondary structure		.																																																		.	.														.
Query SS confidence		.																																																		.	.														.
Query Sequence		.	E	N	E	Q	W	L	D	R	L	S	L	S	D	A	E	R	F	I	E	E	G	H	F	A	K	G	S	M	L	P	K	V	E	A	A	A	S	F	A	R	S	R	A	G	R	E	A	L	I	.	.	T	V	L	S	K	A	K	E	G	I	E	G	K	.	T	G	T	V	I
Query Conservation		.																																																		.	.														.
Alig confidence		.											.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.														.
Template Conservation													.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		N	P	D	A	V	L	L	R	D	I	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	N	G	I	G	K	K	F	E	S	X	V	K	X	K	S	S	V	K	N	G	V	Y	L	I	N	G	N	H	P	E	R	I	G	D	I	G	K	E	S	F	I	G	T	V	I
Template Known Secondary structure			T	T			B						.	.	.	.	.	.	.	.	.	.	.	.	.	.														G	G	G	T		S	S							T	T	S	G	G	G	G	G	G	T	T	S	S	S			S
Template Predicted Secondary structure													.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		176	.	.	.	180	.	.	.	.	.	.															.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions