Job Description Q46807 Confidence 100.00% Date Thu Jan 5 12:34:33 GMT 2012 Rank 32 Aligned Residues 232 % Identity 18% Template c3k4yB_ PDB info PDB header:transferase Chain: B: PDB Molecule:isopentenyl phosphate kinase; PDBTitle: crystal structure of isopentenyl phosphate kinase from m. jannaschii2 in complex with ipp Resolution 2.54 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.				20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.							.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.
Predicted Secondary structure																		.	.	.																				.	.	.	.	.	.
Query SS confidence																		.	.	.																				.	.	.	.	.	.
Query Sequence		K	I	V	L	A	L	G	G	N	A	L	G	D	D	L	A	.	.	.	G	Q	M	K	A	V	K	I	T	S	Q	A	I	V	D	L	I	A	Q	.	.	.	.	.	.	G	H	E	V	I	V	T	H	G	N	G	P	Q	V	G	M	I	N	Q	A	F	E	A	A	A	K	T	E	A	H	S	P	M	L	P	M
Query Conservation																		.	.	.																				.	.	.	.	.	.
Alig confidence																		.	.	.																				.	.	.	.	.	.
Template Conservation
Template Sequence		L	T	I	L	K	L	G	G	S	I	L	S	D	K	N	V	P	Y	S	I	K	W	D	N	L	E	R	I	A	M	E	I	K	N	A	L	D	Y	Y	K	N	Q	N	K	E	I	K	L	I	L	V	H	G	G	G	A	F	G	H	P	V	A	K	K	Y	L	K	I	E	D	G	K	K	I	F	I	N	M	E	K
Template Known Secondary structure									T	T	T	S	S		T	T	S	T	T																								T	T																					T	T				S	S	S	S
Template Predicted Secondary structure
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	V	C	V	A	L	S	Q	G	Y	I	G	Y	D	L	Q	N	A	L	R	E	E	L	L	S	R	G	I	N	K	P	V	A	T	L	V	T	Q	V	E	V	D	A	N	D	P	A	F	L	N	P	T	K	P	I	G	S	F	F	T	E	Q	E	A	E	Q	L	T	K	Q	G	Y	T	L	K	E	D	A	G	R
Query Conservation
Alig confidence				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	W	E	I	Q	R	A	M	R	R	F	N	N	I	I	I	D	T	L	Q	S	Y	D	I	P	A	V	S	I	Q	P	S	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					T	T								G	G	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		82	.																	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.
		155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	Y	R	R	V	V	A	S	P	K	P	V	D	I	I	E	K	E	T	V	K	A	L	V	D	A	G	Q	V	V	I	T	V	G	G	G	G	I	P	V	I	R	E	G	N	H	L	R	G	A	S	A	V	I	D	K	D	W	A	S	A	R	L	A	E	M	I	D	A	D	M	L	I	I	L	T	A	V	E	K
Query Conservation
Alig confidence		.	.	.	.	.																																		.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.																																		.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	F	V	V	F	G	D	K	L	I	F	D	T	S	A	I	K	E	M	L	K	R	N	L	V	P	V	I	H	G	D	I	V	I	.	.	.	.	.	.	.	D	D	K	N	G	Y	R	I	I	S	G	D	D	I	V	P	Y	L	A	N	E	L	K	A	D	L	I	L	Y	A	T	D	V	D	G
Template Known Secondary structure		.	.	.	.	.	T					S	S														T	T												.	.	.	.	.	.	.		T	T	T																			T		S							S	S	S	S
Template Predicted Secondary structure		.	.	.	.	.																																		.	.	.	.	.	.	.
Template SS confidence
							116	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.								.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.
		235	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290				.	.	.	.	.	.	.	.	.	300	.	.	.		.	.	.	.	.
Predicted Secondary structure																																																										.	.	.														.
Query SS confidence																																																										.	.	.														.
Query Sequence		V	A	I	N	F	G	K	E	N	E	Q	W	L	D	R	L	S	L	S	D	A	E	R	F	I	E	E	G	H	F	A	K	G	S	M	L	P	K	V	E	A	A	A	S	F	A	R	S	R	A	G	R	E	A	L	I	.	.	.	T	V	L	S	K	A	K	E	G	I	E	G	K	.	T	G	T	V	I
Query Conservation																																																										.	.	.														.
Alig confidence								.	.	.	.	.														.	.	.	.	.																	.	.	.	.	.							.	.	.														.
Template Conservation								.	.	.	.	.														.	.	.	.	.																	.	.	.	.	.
Template Sequence		V	L	I	D	N	K	.	.	.	.	.	P	I	K	R	I	D	K	N	N	I	Y	K	I	.	.	.	.	.	L	N	Y	L	G	M	K	Y	K	I	E	M	I	R	K	N	.	.	.	.	.	K	C	R	G	F	V	F	N	G	N	K	A	N	N	I	Y	K	A	L	L	G	E	V	E	G	T	E	I
Template Known Secondary structure		S			T	T		.	.	.	.	.			S				S	S	T	T				.	.	.	.	.													T	T	T	T	.	.	.	.	.	T								S	S	S	T	T							T	T				S
Template Predicted Secondary structure								.	.	.	.	.														.	.	.	.	.																	.	.	.	.	.
Template SS confidence
		184	.	.	.	.	.						190	.	.	.	.	.	.	.	.	.	200	.	.						.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.						.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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