Job Description Q46807 Confidence 100.00% Date Thu Jan 5 12:34:33 GMT 2012 Rank 39 Aligned Residues 220 % Identity 15% Template c2va1A_ PDB info PDB header:transferase Chain: A: PDB Molecule:uridylate kinase; PDBTitle: crystal structure of ump kinase from ureaplasma parvum Resolution 2.50 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20			.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																					.	.
Query SS confidence																					.	.
Query Sequence		S	K	K	I	V	L	A	L	G	G	N	A	L	G	D	D	L	A	G	.	.	Q	M	K	A	V	K	I	T	S	Q	A	I	V	D	L	I	A	Q	G	H	E	V	I	V	T	H	G	N	G	P	Q	V	G	M	I	N	Q	A	F	E	A	A	A	K	T	E	A	H	S	P	M	L	P	M	S	V	C	V	A
Query Conservation																					.	.
Alig confidence																					.	.																																																.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																																						.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	Q	R	I	V	I	K	I	S	G	A	C	L	K	Q	N	D	S	S	I	I	D	F	I	K	I	N	D	L	A	E	Q	I	E	K	I	S	K	K	Y	I	V	S	I	V	L	G	G	G	N	I	W	R	G	S	I	A	K	E	L	D	M	D	R	N	L	A	D	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure			S								G	G	G	G		S	S	T	T		S	S																T	T	T	S									T	T	T									T	T								.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																						.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	S	Q	G	Y	I	G	Y	D	L	Q	N	A	L	R	E	E	L	L	S	R	G	I	N	K	P	V	A	T	L	V	T	Q	V	E	V	D	A	N	D	P	A	F	L	N	P	T	K	P	I	G	S	F	F	T	E	Q	E	A	E	Q	L	T	K	Q	G	Y	T	L	K	E	D	A	G	R	G	Y	R	R	V
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	N	M	G	M	M	A	T	I	I	N	G	L	A	L	E	N	A	L	N	H	L	N	V	N	T	I	V	L	S	A	I	K	C	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.																				T	T	T								S	S			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
															71	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.		.	.	.	.	.	.	.
Predicted Secondary structure																																																																										.
Query SS confidence																																																																										.
Query Sequence		V	A	S	P	K	P	V	D	I	I	E	K	E	T	V	K	A	L	V	D	A	G	Q	V	V	I	T	V	G	G	G	G	I	P	V	I	R	E	G	N	H	L	R	G	A	S	A	V	I	D	K	D	W	A	S	A	R	L	A	E	M	I	D	A	D	M	L	I	I	L	T	A	.	V	E	K	V	A	I	N
Query Conservation																																																																										.
Alig confidence		.	.	.																																.	.	.	.	.	.	.	.	.	.	.	.	.																										.
Template Conservation		.	.	.																																.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	D	K	L	V	H	E	S	S	A	N	N	I	K	K	A	I	E	K	E	Q	V	M	I	F	V	A	G	T	G	F	P	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	F	T	T	D	S	C	A	A	I	R	A	A	E	T	E	S	S	I	I	L	M	G	K	N	G	V	D	G	V	Y	D	S
Template Known Secondary structure		.	.	.	T	T	T															T	T							S	T	T	S	S	S	.	.	.	.	.	.	.	.	.	.	.	.	.	S															T		S							S	S			S	B		S
Template Predicted Secondary structure		.	.	.																																.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
					104	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.														.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.
		239	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.		.	.	.	.	.	.	.	300	.	.	.		.	.	.	.	.	.	310
Predicted Secondary structure																																																								.												.
Query SS confidence																																																								.												.
Query Sequence		F	G	K	E	N	E	Q	W	L	D	R	L	S	L	S	D	A	E	R	F	I	E	E	G	H	F	A	K	G	S	M	L	P	K	V	E	A	A	A	S	F	A	R	S	R	A	G	R	E	A	L	I	T	V	.	L	S	K	A	K	E	G	I	E	G	K	.	T	G	T	V	I	C	Q
Query Conservation																																																								.												.
Alig confidence				.	.	.	.	.	.													.	.	.	.	.	.	.	.																											.												.
Template Conservation				.	.	.	.	.	.													.	.	.	.	.	.	.	.
Template Sequence		D	F	.	.	.	.	.	.	Y	E	H	I	T	F	N	M	A	L	T	Q	.	.	.	.	.	.	.	.	N	L	K	V	M	D	A	T	A	L	A	L	C	Q	E	N	N	I	N	L	L	V	F	N	I	D	K	P	N	A	I	V	D	V	L	E	K	K	N	K	Y	T	I	V	S	K
Template Known Secondary structure				.	.	.	.	.	.	B	S											.	.	.	.	.	.	.	.	T			S	S											T	T								S	S	S	T	T							T	T		S
Template Predicted Secondary structure				.	.	.	.	.	.													.	.	.	.	.	.	.	.
Template SS confidence
		168	.							170	.	.	.	.	.	.	.	.	.	180	.									.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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