Phyre 2 alignment of Q46807 with c2j0wA

Job Description Q46807
Confidence 100.00% Date Thu Jan 5 12:34:33 GMT 2012

Rank 37 Aligned Residues 267

% Identity 16% Template c2j0wA_

PDB info PDB header:transferase Chain: A: PDB Molecule:lysine-sensitive aspartokinase 3; PDBTitle: crystal structure of e. coli aspartokinase iii in complex2 with aspartate and adp (r-state)

Resolution 2.5 Å

	Insertion relative to template
	Deletion relative to template
	Catalytic residue from the CSA

Detailed help on interpreting your alignment

	3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence	K	K	I	V	L	A	L	G	G	N	A	L	G	D	D	L	A	G	Q	M	K	A	V	K	I	T	S	Q	A	I	V	D	L	I	A	Q	G	H	E	V	I	V	T	H	G	N	G	P	Q	V	G	M	I	N	Q	A	F	E	A	A	A	K	T	E	A	H	S	P	M	L	P	M	S	V	C	V	A	L	S	Q
Query Conservation
Alig confidence																.	.	.	.	.											.	.	.																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																.	.	.	.	.											.	.	.																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence	E	I	V	V	S	K	F	G	G	T	S	V	A	D	F	.	.	.	.	.	D	A	M	N	R	S	A	D	I	V	.	.	.	L	S	D	A	N	V	R	L	V	V	L	S	A	S	A	G	I	T	N	L	L	V	A	L	A	E	G	L	E	P	G	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R
Template Known Secondary structure									S	G	G	G	S	S		.	.	.	.	.											.	.	.	T	S		T	T										T	T									T	T							.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																.	.	.	.	.											.	.	.																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
	3	.	.	.	.	.	.	10	.	.	.	.	.	.	.						.	.	20	.	.	.	.	.	.	.				.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.															60

	83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.																.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.
Predicted Secondary structure																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence	G	Y	I	G	Y	D	L	Q	N	A	L	R	E	E	L	L	S	R	G	I	N	K	P	V	A	T	L	V	T	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	E	V	D	A	N	D	P	A	F	L	N	P	T	K	P	I	G	S	F	F	T	E	Q	E	A	E	Q	L	T	K	Q	G	Y	T
Query Conservation																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence	F	E	K	L	D	A	I	R	N	I	Q	F	A	I	L	E	R	L	R	Y	P	N	V	I	R	E	E	I	E	R	L	L	E	N	I	T	V	L	A	E	A	A	A	L	A	T	S	P	A	L	T	D	E	L	V	S	H	G	E	L	M	S	T	L	L	F	V	E	I	L	R	E	R	D	V	Q	A	Q	W	F
Template Known Secondary structure																T	T	S	S	S	T																						T	T																												T	T	S
Template Predicted Secondary structure
Template SS confidence
	61	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140

	148	.	150	.	.	.	.	.				.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.
Predicted Secondary structure									.	.	.
Query SS confidence									.	.	.
Query Sequence	L	K	E	D	A	G	R	G	.	.	.	Y	R	R	V	V	A	S	P	K	P	V	D	I	I	E	K	E	T	V	K	A	L	V	D	A	G	Q	V	V	I	T	V	G	G	G	G	I	P	V	I	R	E	G	N	H	L	R	G	A	S	A	V	I	D	K	D	W	A	S	A	R	L	A	E	M	I	D	A	D
Query Conservation									.	.	.
Alig confidence									.	.	.																											.										.	.	.	.
Template Conservation																																						.										.	.	.	.
Template Sequence	D	V	R	K	V	M	R	T	N	D	R	F	G	R	A	E	P	D	I	A	A	L	A	E	L	A	A	L	Q	L	L	P	R	L	N	E	G	.	L	V	I	T	Q	G	F	I	G	.	.	.	.	S	E	N	K	G	R	T	T	T	L	G	R	G	G	S	D	Y	T	A	A	L	L	A	E	A	L	H	A	S
Template Known Secondary structure		G	G	G	T		B	B		S		T	T	S			B													T							S	.						S	S			.	.	.	.			T	T	S							T	T													T	T		S
Template Predicted Secondary structure																																						.										.	.	.	.
Template SS confidence
	141	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.		.	.	180	.	.	.	.	.	.					.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.

	225	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.			.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290			.	.	.	.	.	.	.	.	.	300
Predicted Secondary structure																		.	.																																																		.	.
Query SS confidence																		.	.																																																		.	.
Query Sequence	M	L	I	I	L	T	A	V	E	K	V	A	I	N	F	G	K	.	.	E	N	E	Q	W	L	D	R	L	S	L	S	D	A	E	R	F	I	E	E	G	H	F	A	K	G	S	M	L	P	K	V	E	A	A	A	S	F	A	R	S	R	A	G	R	E	A	L	I	.	.	T	V	L	S	K	A	K	E	G	I
Query Conservation																		.	.																																																		.	.
Alig confidence																		.	.																									.	.	.					.	.	.																.	.							.	.	.	.
Template Conservation																																												.	.	.					.	.	.																								.	.	.	.
Template Sequence	R	V	D	I	W	T	D	V	P	G	I	Y	T	T	D	P	R	V	V	S	A	A	K	R	I	D	E	I	A	F	A	E	A	A	E	M	A	T	F	G	A	K	V	.	.	.	L	H	P	A	.	.	.	T	L	L	P	A	V	R	S	D	I	P	V	F	V	G	S	S	K	D	P	R	A	G	.	.	.	.
Template Known Secondary structure							S	S	S	S			S	S		T	T	T		T	T					S													T	T		T	T	.	.	.	S		T	T	.	.	.	T								T								S	S		T	T	S		.	.	.	.
Template Predicted Secondary structure																																												.	.	.					.	.	.																								.	.	.	.
Template SS confidence
	216	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.				.	260	.	.				.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.

	301	.	.	.	.	.	.	.	.	310
Predicted Secondary structure
Query SS confidence
Query Sequence	E	G	K	T	G	T	V	I	C	Q
Query Conservation
Alig confidence	.	.	.	.
Template Conservation	.	.	.	.
Template Sequence	.	.	.	.	G	T	L	V	C	N
Template Known Secondary structure	.	.	.	.						S
Template Predicted Secondary structure	.	.	.	.
Template SS confidence
					286	.	.	.	290	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server

Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]

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Lawrence Kelley, Benjamin Jefferys
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