|   |
6 | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | |
|
Predicted Secondary structure |   |
 |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
| . | . |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
Query Sequence |   |
S | Y | H | R | A | A | T | L | A | D | A | I | N | L | L | A | D | N | P | Q | A | K | L | L | A | G | G | T | D | V | L | I | Q | L | H | H | H | N | D | R | Y | R | H | I | V | D | I | H | N | L | A | E | L | R | G | I | T | L | A | E | D | G | S | L | R | I | G | S | A | T | T | F | T | Q | L | I | E | D | . |
. |
Query Conservation |   |
  |
|   |   |
|   |
|
|   |
|
|   |   |
|
|   |   |   |   |   |
|   |   |
|
|
|
|
|   |
|   |   |   |   |   |   |   |   |   |   |
|   |   |
|
|
|
|   |   |
|   |
|
|   |   |
|   |   |   |   |   |
|   |
|   |
|
|
|   |
|
|   |   |   |
|   |   |   | . | . |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
Template Conservation |   |
  |
|   |   |
|   |
|
|   |
|
|   |   |
|
|   |   |   |
|   |
|   |
|
|
|
|
|
|   |
|   |   |   |   |   |   |   |   |   |   |
|   |   |
|
|
|
|   |   |
|   |
|
|   |   |
|   |   |   |   |   | . |   |
|   |
|
|
|   |
|
|
|   |   |
|   |   |   |   |   |
Template Sequence |   |
T | W | I | Q | A | S | T | L | K | E | L | L | D | L | K | A | Q | H | P | E | A | K | L | V | V | G | N | T | E | I | G | I | E | M | K | F | K | N | Q | L | F | P | M | I | I | C | P | A | W | I | P | E | L | N | A | V | E | H | G | P | E | . |
G | I | S | F | G | A | A | C | A | L | S | S | V | E | K | T | L | L |
Template Known Secondary structure |   |
 |  |  |  |
|
| S |  |  |  |  |  |  |  |  |  |  |
| T | T |
|  |  |
| S | S |
| T | T |  |  |  |  |  |  |  | S |
|
|
|
| S |  |  |  |  |
| T | T |
| G | G | G | T |
|  |  |  |
| S | S | . |  |  |  |  |  | T | T |
| B |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |
|
| . |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
235 | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | |
. | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . |
  |
  |   |
|
|
|
|
|
|
|
84 | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | |
. | 150 | . | . | . | . | . |
Predicted Secondary structure |   |
. | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |  | . |  |  |  |
|
|
|  |
Query SS confidence |   |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
Query Sequence |   |
. |
. |
. |
. |
. |
. |
. |
P | I | T | Q | R | H | L | P | A | L | C | A | A | A | T | S | I | A | G | P | Q | I | R | N | V | A | T | Y | G | G | N | I | C | N | G | A | T | S | A | D | S | A | T | P | T | L | I | Y | D | A | K | L | E | I | H | S | P | R | G | V | R | F | V | P | I | . |
N | G | F | H | T | G | P |
Query Conservation |   |
. | . | . | . | . | . | . |   |   |   |   |   |   |   |
|   |
|   |   |   |   |   |   |
|
|   |   |
|
|
|
|   |
|
|
|
|
|
|
|   |   |
|   |
|   |
|
|   |   |   |   |
|   |
|
|   |
|   |
|   |
|   |   |   |   |
|   |
|   |
|
|   | . |   |
|
|   |   |
|   |
Alig confidence |   |
. | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |
|
|   |   |
|
|
|
|   |
|
|
|
|
|
|
|   |   |
|   |
|   |
|
|   |   |   |   |
|
|
|
|   |
|   |
|   |
|   |   |   |   |
|   |
|   |
|
|
|   |
|   |
|   |   |   |   |
Template Sequence |   |
E | A | V | A | K | L | P | T | Q | K | T | E | V | F | R | G | V | L | E | Q | L | R | W | F | A | G | K | Q | V | K | S | V | A | S | L | G | G | N | I | I | T | A | S | P | I | S | D | L | N | P | V | F | M | A | S | G | T | K | L | T | I | V | S | R | G | T | R | R | T | V | P | M | D | H | T | F | F | P | S | Y |
Template Known Secondary structure |   |
 |  |  |  |  | S |
| G | G | G |
|  |  |  |  |  |  |  |  |  |  |  | T | S | S |
|  |  |  |  | T | T |
| B |  |  |  |  |  |  |  |
|
| T | T |
| S | S |  |  |  |  |  |  | T | T |
|  |  |  |  |  |  | T | T |  |  |  |  |  |  |
|
| G | G | G |
|
| S | T |
Template Predicted Secondary structure |   |
 |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|  |  |  |  |
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
314 | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | . | . | . | 340 | . | . | . | . | . | . | . | . | . | 350 | . | . | . | . | . | . | . | . | . | 360 | . | . | . | . | . | . | . | . | . | 370 | . | . | . | . | . | . | . | . | . | 380 | . | . | . | . | . | . | . | . | . | 390 | . | . | . |
  |
  |   |
156 | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
G | K | V | S | L | E | H | D | E | I | L | V | A | F | H | F | P | P | Q | P | K |
Query Conservation |   |
  |   |
|   |
|   |   |   |
|
|
|   |   |
|   |
|
|   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |
|   |   |   |
|
|
|   |   |
|   |
|
|   |   |   |   |
Template Sequence |   |
R | K | T | L | L | G | P | E | E | I | L | L | S | I | E | I | P | Y | S | R | E |
Template Known Secondary structure |   |
T |
|
| S |
|
| T | T |
|  |  |  |  |  |  |  |  |
|
|
|
|
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
394 | . | . | . | . | . | 400 | . | . | . | . | . | . | . | . | . | 410 | . | . | . | . |
  |