Return to main results Retrieve Phyre Job Id

Job DescriptionQ46800
Confidence100.00%DateThu Jan 5 12:34:23 GMT 2012
Rank16Aligned Residues166
% Identity25%Templated1jroa4
SCOP infoFAD-binding/transporter-associated domain-like FAD-binding/transporter-associated domain-like CO dehydrogenase flavoprotein N-terminal domain-like
Resolution2.70

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   7..10.........20.........30.........40.........50.........60.........70.........80......
Predicted Secondary structure 





































Query SS confidence 















































































Query Sequence  YHRAATLADAINLLADNPQAKLLAGGTDVLIQLHHHNDRYRHIVDIHNLAELRGITLAEDGSLRIGSATTFTQLIEDPIT
Query Conservation 
  
 

 

  

     
  




 
          
  



  
 

  
     
 
 


 

   
      
Alig confidence 



























































.














..

Template Conservation     
 

 

  

   
 
  




 
             



  
 

  
     . 
 


 

   
  ..  
Template Sequence  AFLPETSDALADWYLAHPEATLIAGGTDVSLWVTKALRDLPEVAFLSHCKDLAQIRETPD. GYGIGAGVTIAALRA. . FA
Template Known Secondary structure 
B

SS
TT
SS
TTTTS




SGGG
GGGS
TT.TT
B..
Template Predicted Secondary structure 































.




..
Template SS confidence 















































































   180.........190.........200.........210.........220.........230......... 240.........250.... ..
 
   87..90.........100.........110.........120.........130.........140.........150.........160......
Predicted Secondary structure 

























Query SS confidence 















































































Query Sequence  QRHLPALCAAATSIAGPQIRNVATYGGNICNGATSADSATPTLIYDAKLEIHSPRGVRFVPINGFHTGPGKVSLEHDEIL
Query Conservation      
 
      

  



 






  
 
 

    
 

 
 
 
    
 
 

  

  
   
 
   


Alig confidence 















































































Template Conservation      
 
      


 



 






  
 
 

  
 





 
 
    
 
 


 

        
   


Template Sequence  EGPHPALAGLLRRFASEQVRQVATIGGNIANGSPIGDGPPALIAMGASLTLRRGQERRRMPLEDFFLEYRKQDRRPGEFV
Template Known Secondary structure  TTT
TSS
TT
B

TT
STT
BTTB



BGGGGTTS

TT
Template Predicted Secondary structure 
























Template SS confidence 















































































   257..260.........270.........280.........290.........300.........310.........320.........330......
 
   167..170.....
Predicted Secondary structure 



Query SS confidence 








Query Sequence  VAFHFPPQP
Query Conservation    
 

   
Alig confidence 








Template Conservation    
 

  
Template Sequence  ESVTLPKSA
Template Known Secondary structure 
S

Template Predicted Secondary structure 



Template SS confidence 








   337..340.....
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions