Job Description Q46800 Confidence 97.47% Date Thu Jan 5 12:34:23 GMT 2012 Rank 29 Aligned Residues 165 % Identity 15% Template c3fwaA_ PDB info PDB header:flavoprotein Chain: A: PDB Molecule:reticuline oxidase; PDBTitle: structure of berberine bridge enzyme, c166a variant in complex with2 (s)-reticuline Resolution 1.50 Å

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		8	.	10	.	.	.	.	.	.	.	.	.	20	.				.	.	.	.	.		.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
Predicted Secondary structure																.	.	.						.
Query SS confidence																.	.	.						.
Query Sequence		H	R	A	A	T	L	A	D	A	I	N	L	L	A	.	.	.	D	N	P	Q	A	.	K	L	L	A	G	G	T	D	V	L	I	Q	L	H	H	H	N	D	R	Y	R	H	I	V	D	I	H	N	L	A	E	L	R	G	I	T	L	A	E	D	G	S	L	R	I	G	S	A	T	T	F	T	Q	L	I	E	D
Query Conservation																.	.	.						.
Alig confidence																.	.	.						.													.																				.				.																				.
Template Conservation																																					.																				.				.																				.
Template Sequence		I	L	P	G	S	K	E	E	L	S	N	T	I	R	C	I	R	K	G	S	W	T	I	R	L	R	S	G	G	H	S	Y	E	G	L	.	S	Y	T	S	D	T	P	F	I	L	I	D	L	M	N	L	N	R	V	.	S	I	D	.	L	E	S	E	T	A	W	V	E	S	G	S	T	L	G	E	L	Y	Y	.
Template Known Secondary structure						S													T	T	T							S	S				T	T		T	.	T	S			S	S								T	T					.				.	T	T	T	T						T	T		B							.
Template Predicted Secondary structure																																					.																				.				.																				.
Template SS confidence
		75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.		110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.		.	130	.		.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.		.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.			.	.	.	.	.	.	140	.	.	.		.	.	.	.	.	.			150	.	.	.	.	.	.	.
Predicted Secondary structure																				.																																	.	.											.							.	.
Query SS confidence																				.																																	.	.											.							.	.
Query Sequence		P	I	T	Q	R	H	L	P	A	L	C	A	A	A	T	S	I	A	.	G	P	Q	I	R	N	V	A	T	Y	G	G	N	I	C	N	G	A	T	S	A	D	S	A	T	P	T	L	I	Y	D	A	.	.	K	L	E	I	H	S	P	R	G	V	.	R	F	V	P	I	N	.	.	G	F	H	T	G	P	G	K
Query Conservation																				.																																	.	.											.							.	.
Alig confidence		.	.	.	.	.	.	.	.											.																																	.	.											.							.	.
Template Conservation		.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	A	I	T	E	S	S	S	K	L	G	F	T	A	G	W	A	P	T	V	G	T	G	G	H	I	S	G	G	G	F	G	M	M	S	R	K	Y	G	L	A	A	D	N	V	V	D	A	I	L	I	D	A	N	G	A	I	L	D	R	Q	A	M	G	E	D	V	F	W	A	I	R	G
Template Known Secondary structure		.	.	.	.	.	.	.	.							S	S							S		T	T	S	B							T					T	T							G	G	G	G									T	T																		T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.
Template SS confidence
										151	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	S	L	E	H	D	E	I	L	V	A	F	H	F	P	P	Q	P	K	E	H	A	G	S	A	H	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	G	G	G	V	W	G	A	I	Y	A	W	K	I	K	L	L	P	V	P	E	K	V	T	V	F	R
Template Known Secondary structure		S		T	T	S	S															S
Template Predicted Secondary structure
Template SS confidence
		223	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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