Job Description Q46800 Confidence 100.00% Date Thu Jan 5 12:34:23 GMT 2012 Rank 1 Aligned Residues 284 % Identity 28% Template c1n62C_ PDB info PDB header:oxidoreductase Chain: C: PDB Molecule:carbon monoxide dehydrogenase medium chain; PDBTitle: crystal structure of the mo,cu-co dehydrogenase (codh), n-2 butylisocyanide-bound state Resolution 1.09 Å

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		1	.	.	.		.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.		.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
Predicted Secondary structure						.																			.
Query SS confidence						.																			.
Query Sequence		M	F	D	F	.	A	S	Y	H	R	A	A	T	L	A	D	A	I	N	L	L	A	D	.	N	P	Q	A	K	L	L	A	G	G	T	D	V	L	I	Q	L	H	H	H	N	D	R	Y	R	H	I	V	D	I	H	N	L	A	E	L	R	G	I	T	L	A	E	D	G	S	L	R	I	G	S	A	T	T	F	T
Query Conservation						.																			.
Alig confidence						.																			.																																													.
Template Conservation																																																																						.
Template Sequence		M	I	P	G	S	F	D	Y	H	R	P	K	S	I	A	D	A	V	A	L	L	T	K	L	G	E	D	A	R	P	L	A	G	G	H	S	L	I	P	I	M	K	T	R	L	A	T	P	E	H	L	V	D	L	R	D	I	G	D	L	V	G	I	R	E	E	G	T	.	D	V	V	I	G	A	M	T	T	Q	H
Template Known Secondary structure													S	S												G	G	G					S	S		T	T							T	T	S				S						T	T		G	G	G	S						T	T	.						T	T		B
Template Predicted Secondary structure																																																																						.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.		.	70	.	.	.	.	.	.	.	.	.
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	L	I	E	D	P	I	T	Q	R	H	L	P	A	L	C	A	A	A	T	S	I	A	G	P	Q	I	R	N	V	A	T	Y	G	G	N	I	C	N	G	A	T	S	A	D	S	A	T	P	T	L	I	Y	D	A	K	L	E	I	H	S	P	R	G	V	R	F	V	P	I	N	G	F	H	T	G	P	G	K	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	L	I	G	S	D	F	L	A	A	K	L	P	I	I	R	E	T	S	L	L	I	A	D	P	Q	I	R	Y	M	G	T	I	G	G	N	A	A	N	G	D	P	G	N	D	M	P	A	L	M	Q	C	L	G	A	A	Y	E	L	T	G	P	E	G	A	R	I	V	A	A	R	D	Y	Y	Q	G	A	Y	F	T
Template Known Secondary structure																					T	T	S	S									B							S			T	T		S									T								T	T														T	T
Template Predicted Secondary structure
Template SS confidence
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	L	E	H	D	E	I	L	V	A	F	H	F	P	P	Q	P	K	E	H	A	G	S	A	H	F	K	Y	A	M	R	D	A	M	D	I	S	T	I	G	C	A	A	H	C	R	L	D	N	G	N	F	S	E	L	R	L	A	F	G	V	A	A	P	T	P	I	R	C	Q	H	A	E	Q	T	A	Q	N	A	P
Query Conservation
Alig confidence																.														.
Template Conservation																.														.
Template Sequence		A	I	E	P	G	E	L	L	T	A	I	R	I	P	.	V	P	P	T	G	H	G	Y	A	Y	E	K	L	.	K	R	K	I	G	D	Y	A	T	A	A	A	A	V	V	L	T	M	S	G	G	K	C	V	T	A	S	I	G	L	T	N	V	A	N	T	P	L	W	A	E	E	A	G	K	V	L	V	G	T	A
Template Known Secondary structure		S			T	T										.				T	T									.		S	S	T	T				S											T	T											S	S	S	S	S												T	T	S
Template Predicted Secondary structure																.														.
Template SS confidence
		160	.	.	.	.	.	.	.	.	.	170	.	.	.		.	.	.	.	.	.	180	.	.	.	.	.	.		.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.
		239	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	N	L	Q	T	L	E	A	I	S	E	S	V	L	Q	D	V	A	P	R	S	S	W	R	A	S	K	E	F	R	L	H	L	I	Q	T	M	T	K	K	V	I	S	E	A	V	A	A	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	D	K	P	A	L	D	K	A	V	A	L	A	E	A	I	T	A	P	A	S	D	G	R	G	P	A	E	Y	R	T	K	M	A	G	V	M	L	R	R	A	V	E	R	A	K	A	R	A
Template Known Secondary structure																							B	T	T	B
Template Predicted Secondary structure
Template SS confidence
		238	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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