 |
Job Description | P0ADR6 | Confidence | 96.87% | Date | Thu Jan 5 11:21:40 GMT 2012 |
Rank | 160 | Aligned Residues | 110 |
% Identity | 17% | Template | d2b25a1 |
SCOP info | S-adenosyl-L-methionine-dependent methyltransferases
| S-adenosyl-L-methionine-dependent methyltransferases
| tRNA(1-methyladenosine) methyltransferase-like
|
Resolution | 2.50 |
|
 |
  |   |
209 | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | |
|
|
. | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | |
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | |
|
. | 270 | . | . |
Predicted Secondary structure |   |
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |
| . | . | . |
|
|  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |
| . | . | . | . | . | . | . | . | . | . | . |
|
|
|  |  |  |  |  |
|
|
|  |  |  |  |
|
|
| . | . |
|
|  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
Query Sequence |   |
L | A | N | G | M | W | A | V | D | L | G | A | C | P | G | G | W | T | Y | Q | L | V | K | R | . |
. |
. |
N | M | W | V | Y | S | V | D | N | G | P | M | A | Q | S | L | M | D | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
T | G | Q | V | T | W | L | R | E | D | G | F | K | F | R | P | T | R | . |
. |
S | N | I | S |
Query Conservation |   |
|   |   |
|   |   |
|
|
|
|
|
|
|
|
|
|
|
|   |   |
|   |   |   | . | . | . |
|   |   |
|   |
|
|
|   |
|   |
|   |   |   |
|   |   | . | . | . | . | . | . | . | . | . | . | . |   |   |   |
|   |
|   |   |   |
|
|
|   |   |   |
|   |   | . | . |   |   |
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
Template Conservation |   |
|   |
|
|   |
|
|
|
|   |
|   |
|
|
|   |
|
|   |   |
|
|   |   |   |
|   |   |
|   |
|   |   |
|
|   |   |   |   |   |   |   |   |
|
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
Template Sequence |   |
I | N | P | G | D | T | V | L | E | A | G | S | G | S | G | G | M | S | L | F | L | S | K | A | V | G | S | Q | G | R | V | I | S | F | E | V | R | K | D | H | H | D | L | A | K | K | N | Y | K | H | W | R | D | S | W | K | L | S | H | V | E | E | W | P | D | N | V | D | F | I | H | K | D | I | S | G | A | T | F | D |
Template Known Secondary structure |   |
|
| T | T |
|  |  |  |  |  |
|
| T | T | S |  |  |  |  |  |  |  |  |  |  |
| T | T |
|  |  |  |  |  |  | S | S |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | T |
| S | S |
|
|
|
|
|  |  |  |  |  | S |
| T | T |
|
|
|  |  |
Template Predicted Secondary structure |   |
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |
|
|
|
|
|
|
|
|  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
101 | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 |
  |
  |   |
273 | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
W | M | V | C | D | M | V | E | K | P | A | K | V | A | A | L | M | A | Q | W | L | V | N | G | W | C | R | E | T | I | F | N | L | K | L | P | M | K | K | R | Y | E | E | V | S | H | N | L | A | Y | I | Q | A | Q |
Query Conservation |   |
|
|
|
|
|
|   |   |   |
|   |
|   |   |   |
|   |   |   |
|
|   |   |   |   |   |   |   |
|
|   |
|
|
|
|
|
|
|   |
|   |   |   |
|   |   |   |
|   |   |
|   |   |   |
Alig confidence |   |
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|   |   |
|   |
| . |   |
|   |   |   |
|   |   |   |   |   |   |
|
|
|
| . | . |
|   |
|
|   |   |   |
|   | . | . | . | . | . |   |   |
|
|   |   |   |   |   |   |
|   |   |   |
Template Sequence |   |
A | V | A | L | D | M | L | . |
N | P | H | V | T | L | P | V | F | Y | P | H | L | K | H | G | . |
. |
G | V | C | A | V | Y | V | V | N | . |
. |
. |
. |
. |
I | T | Q | V | I | E | L | L | D | G | I | R | T | C |
Template Known Secondary structure |   |
 |  |  |  |
| S | S | . | S | T | T | T | T |  |  |  |  | G | G | G |  |  |  |  | . | . |  |  |  |  |  |  |  | S | S | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |
|
|  | . |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
| . | . |
|  |  |  |  |  |  |
|
| . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
188 | . | 190 | . | . | . | . | |
. | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | |
|
. | . | . | . | . | . | . | . | . | |
|
|
|
|
220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|