 |
Job Description | P0ADR6 | Confidence | 97.52% | Date | Thu Jan 5 11:21:40 GMT 2012 |
Rank | 88 | Aligned Residues | 89 |
% Identity | 19% | Template | d1uwva2 |
SCOP info | S-adenosyl-L-methionine-dependent methyltransferases
| S-adenosyl-L-methionine-dependent methyltransferases
| (Uracil-5-)-methyltransferase
|
Resolution | 1.95 |
|
 |
  |   |
209 | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | |
|
|
|
|
|
|
250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | |
|
|
|
. | 270 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|
|
|  |  |  |  | . | . | . | . | . | . | . |
|
|
|
|  |  |  |  |  |
|
|
|  |  |  |  |
|
|
| . | . | . | . |
|
|  |  |  |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | A | N | G | M | W | A | V | D | L | G | A | C | P | G | G | W | T | Y | Q | L | V | K | R | N | M | W | V | Y | S | V | D | N | G | P | M | A | Q | S | L | M | . |
. |
. |
. |
. |
. |
. |
D | T | G | Q | V | T | W | L | R | E | D | G | F | K | F | R | P | T | R | . |
. |
. |
. |
S | N | I | S | W | M | V | C | D |
Query Conservation |   |
|   |   |
|   |   |
|
|
|
|
|
|
|
|
|
|
|
|   |   |
|   |   |   |
|   |   |
|   |
|
|
|   |
|   |
|   |   |   |
|   | . | . | . | . | . | . | . |   |   |   |   |
|   |
|   |   |   |
|
|
|   |   |   |
|   |   | . | . | . | . |   |   |
|
|
|
|
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |
|
|
|
|   |   |
|   |
|   |   |   |   |   |
|
|   |   |   |   |   |
|   |   |
|
|   |   |   |   |
|
|   |   |
|   |   |
|   |   |   |
|   |   |   |
|
|   |   |   |   |   |
|   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |
|   |
|
|   |
|
Template Sequence |   |
V | Q | P | E | D | R | V | L | D | L | F | C | G | X | G | N | F | T | L | P | L | A | T | Q | A | A | S | V | V | G | V | E | G | V | P | A | L | V | E | K | G | Q | Q | N | A | R | L | N | G | L | Q | N | V | T | F | Y | H | E | N | L | E | E | D | V | T | K | Q | P | W | A | K | N | G | F | D | K | V | L | L | D |
Template Known Secondary structure |   |
|
| T | T |
|  |  |  |  |  | S |
| T | T | T | T | T |  |  |  |  |  | T | T | S | S |  |  |  |  |  |  | S |
|  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
| S |  |  |  |  |  |
|
| T | T | S |
|
| S | S | S | G | G | G | T | T |
|
| S |  |  |  |  |
|
Template Predicted Secondary structure |   |
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
284 | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | . | . | . | 340 | . | . | . | . | . | . | . | . | . | 350 | . | . | . | . | . | . | . | . | . | 360 | . | . | . |
  |
  |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
278 | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
. | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
Query SS confidence |   |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
M | V | E | K | P | A | K | V | A | A | L | M | A | Q | W | L | V | N | G | W |
Query Conservation |   |
. | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|   |   |   |
|   |
|   |   |   |
|   |   |   |
|
|   |   |   |   |
Alig confidence |   |
. | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|
|
|
|
|   |
|   |
|   |   |
|
|   |   |   |
|   |   |   |
|   |
Template Sequence |   |
P | A | R | A | G | A | A | G | V | X | Q | Q | I | I | K | L | E | P | I | R | I | V | Y | V | S | C | N | P | A | T | L | A | R | D | S | E | A | L | L | K | A | G | Y |
Template Known Secondary structure |   |
|
| T | T |
|
|  |  |  |  |  |  |  |  |  |  |
|
| S |  |  |  |  |  |  | S |
|  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
Template Predicted Secondary structure |   |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
364 | . | . | . | . | . | 370 | . | . | . | . | . | . | . | . | . | 380 | . | . | . | . | . | . | . | . | . | 390 | . | . | . | . | . | . | . | . | . | 400 | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|