|   |
209 | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | |
|
|
. | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | |
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |
| . | . | . |
|
|  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |
| . | . | . | . | . | . | . | . | . | . |
|
|
|  |  |  |  |  |
|
|
|  |  |  |  |
|
|
|
|
|  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | A | N | G | M | W | A | V | D | L | G | A | C | P | G | G | W | T | Y | Q | L | V | K | R | . |
. |
. |
N | M | W | V | Y | S | V | D | N | G | P | M | A | Q | S | L | M | D | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
T | G | Q | V | T | W | L | R | E | D | G | F | K | F | R | P | T | R | S | N | I | S | W | M | V |
Query Conservation |   |
|   |   |
|   |   |
|
|
|
|
|
|
|
|
|
|
|
|   |   |
|   |   |   | . | . | . |
|   |   |
|   |
|
|
|   |
|   |
|   |   |   |
|   |   | . | . | . | . | . | . | . | . | . | . |   |   |   |
|   |
|   |   |   |
|
|
|   |   |   |
|   |   |   |   |
|
|
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |
|
|   |
|
|
|
|   |
|   |
|
|
|   |
|
|   |   |
|
|   |   |   |   |   |   |
|   |
|   |   |   |
|   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |
|
|   |
|   |
Template Sequence |   |
I | F | P | G | A | R | V | L | E | A | G | A | G | S | G | A | L | T | L | S | L | L | R | A | V | G | P | A | G | Q | V | I | S | Y | E | Q | R | A | D | H | A | E | H | A | R | R | N | V | S | G | C | Y | G | Q | P | P | D | N | W | R | L | V | V | S | D | L | A | D | S | E | L | P | D | G | S | V | D | R | A | V |
Template Known Secondary structure |   |
|
| T | T |
|  |  |  |  |  |
|
| T | T | S |  |  |  |  |  |  |  |  |  |  |
| T | T | S |  |  |  |  |  |
| S |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | S |
|
| T | T |  |  |  |  |
| S |
| G | G | G |
|
|
|
| T | T |
|  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
97 | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . |
  |
  |   |
276 | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | . | . | . | 340 | . | . | . | . | . | . | . | . | . | |
|
|
|
|
|
Predicted Secondary structure |   |
 |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|  |  |  | . | . | . | . | . | . |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
Query Sequence |   |
C | D | M | V | E | K | P | A | K | V | A | A | L | M | A | Q | W | L | V | N | G | W | C | R | E | T | I | F | N | L | K | L | P | M | K | K | R | Y | E | E | V | S | H | N | L | A | Y | I | Q | A | Q | L | D | E | H | G | I | N | A | Q | I | Q | A | R | Q | L | Y | H | D | R | E | E | V | T | . |
. |
. |
. |
. |
. |
Query Conservation |   |
|
|
|   |   |   |
|   |
|   |   |   |
|   |   |   |
|
|   |   |   |   |   |   |   |
|
|   |
|
|
|
|
|
|
|   |
|   |   |   |
|   |   |   |
|   |   |
|   |   |   |   |   |   |   |
|   |   |   |   |   |   |
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
Template Conservation |   |
  |
|   |
|   |   |   |   |   |
|   |   |   |   |   |   |
|
|
|
|
|   |
|
|   |   |   |
|   | . | . | . | . | . | . | . | . | . | . | . | . |
|   |
|
|   |   |   |   |   |   |
|   |   |   |   |   |
|   |   |
|   |   |   |
|   |   |   |
|   |   |   |
|   |   |   |   |   |
|
|
Template Sequence |   |
L | D | M | L | A | P | W | E | V | L | D | A | V | S | R | L | L | V | A | G | G | V | L | M | V | Y | V | A | T | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
V | T | Q | L | S | R | I | V | E | A | L | R | A | K | Q | C | W | T | E | P | R | A | W | E | T | L | Q | R | G | W | N | V | V | G | L | A | V | R | P |
Template Known Secondary structure |   |
 |  | S | S |
| G | G | G | G |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | S | S | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  | S | S | B |
|
|
|  |  |  |
|
|
|
|
|
|  |  |  |  | T | T |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |
|
| . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
177 | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . |
  |
  |   |
|
|
|
|
|
|
|
|
|
|
|
350 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
. | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |
|
|
|
|
|
Query SS confidence |   |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
V | H | V | R | R | I | W | A | A | V |
Query Conservation |   |
. | . | . | . | . | . | . | . | . | . | . |
|   |   |   |
|   |   |   |   |   |
Alig confidence |   |
. | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |
|
|
|
|
|
|   |   |
|
|
|   |   |   |
|   |
Template Sequence |   |
Q | H | S | M | R | G | H | T | A | F | L | V | A | T | R | R | L | A | P | G | A |
Template Known Secondary structure |   |
| S |
|
|
|
|
| S |
|  |  |  |  |  |  | B |
|
| T | T |
|
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
245 | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . |
  |