Job Description P0ADR6 Confidence 95.43% Date Thu Jan 5 11:21:40 GMT 2012 Rank 228 Aligned Residues 142 % Identity 23% Template c3q87B_ PDB info PDB header:transferase activator/transferase Chain: B: PDB Molecule:n6 adenine specific dna methylase; PDBTitle: structure of eukaryotic translation termination complex2 methyltransferase mtq2-trm112 Resolution 2.00 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		184	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	P	S	R	S	T	L	K	L	E	E	A	F	H	V	F	I	P	A	D	E	W	D	E	R	L	A	N	G	M	W	A	V	D	L	G	A	C	P	G	G	W	T	Y	Q	L	V	K	R	N	M	W	V	Y	S	V	D	N	G	P	M	A	Q	S	L	M	D	T	G	Q	V	T	W	L	R	E	D	G	F	K
Query Conservation
Alig confidence																		.	.	.	.	.	.	.	.	.																										.										.	.
Template Conservation																		.	.	.	.	.	.	.	.	.																										.										.	.
Template Sequence		E	P	G	E	D	T	Y	T	L	M	D	A	L	E	R	E	.	.	.	.	.	.	.	.	.	G	L	E	M	K	I	V	L	D	L	G	T	S	T	G	V	I	T	E	Q	L	R	K	R	N	.	T	V	V	S	T	D	L	N	I	.	.	R	A	L	E	S	H	R	G	G	N	L	V	R	A	D	L	L	C
Template Known Secondary structure																		.	.	.	.	.	.	.	.	.	T			S							T		T	T								T	T	T	S	.							S			.	.					T		S	S	S						S	T	T	T
Template Predicted Secondary structure																		.	.	.	.	.	.	.	.	.																										.										.	.
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20										.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.		.	.	.	.	50	.	.	.	.			.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.
		264	.	.	.	.	.	270	.	.	.	.	.	.														.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330
Predicted Secondary structure															.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence															.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		F	R	P	T	R	S	N	I	S	W	M	V	C	.	.	.	.	.	.	.	.	.	.	.	.	.	D	M	V	E	K	P	A	K	V	A	A	L	M	A	Q	W	L	V	N	G	W	C	R	E	T	I	F	N	L	K	L	P	M	K	K	R	Y	E	E	V	S	H	N	L	A	Y	I	Q	A	Q	L	D	E	H
Query Conservation															.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence								.							.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.										.	.	.	.	.	.	.	.	.	.
Template Conservation								.																																								.	.										.	.	.	.	.	.	.	.	.	.
Template Sequence		S	I	N	Q	E	S	.	V	D	V	V	V	F	N	P	P	Y	V	P	D	T	D	D	P	I	I	G	G	G	Y	L	G	R	E	V	I	D	R	F	V	D	A	V	T	V	G	.	.	M	L	Y	L	L	V	I	E	A	.	.	.	.	.	.	.	.	.	.	N	R	P	K	E	V	L	A	R	L	E	E	R
Template Known Secondary structure		T	S		G	G	G	.		S									B	T	T				T	T	T	B			G	G	G													S	S	.	.								G	G	.	.	.	.	.	.	.	.	.	.	G												T
Template Predicted Secondary structure								.																																								.	.										.	.	.	.	.	.	.	.	.	.
Template SS confidence
		73	.	.	.	.	.		.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.			.	.	120	.	.	.	.	.	.											.	.	.	130	.	.	.	.	.	.	.	.	.
		331	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	I	N	A	Q	I	Q	A	R	Q	L	Y	H	D	R	E	E	V	T	V	H
Query Conservation
Alig confidence					.
Template Conservation					.
Template Sequence		G	Y	G	.	T	R	I	L	K	V	R	K	I	L	G	E	T	V	Y	I	I
Template Known Secondary structure		T			.										S	S	S
Template Predicted Secondary structure					.
Template SS confidence
		140	.	.		.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions