Job Description P0ADR6 Confidence 43.04% Date Thu Jan 5 11:21:40 GMT 2012 Rank 307 Aligned Residues 124 % Identity 15% Template c3pt6B_ PDB info PDB header:transferase/dna Chain: B: PDB Molecule:dna (cytosine-5)-methyltransferase 1; PDBTitle: crystal structure of mouse dnmt1(650-1602) in complex with dna Resolution 3.00 Å

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		213	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.			.	.	.	.	.	240	.	.	.	.	.	.	.	.	.			250	.	.	.	.	.	.	.	.	.	260	.	.	.																	.	.	.	.	.	.	270	.	.
Predicted Secondary structure																								.	.																.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																								.	.																.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	W	A	V	D	L	G	A	C	P	G	G	W	T	Y	Q	L	V	K	R	N	M	.	.	W	V	Y	S	V	D	N	G	P	M	A	Q	S	L	M	.	.	D	T	G	Q	V	T	W	L	R	E	D	G	F	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	R	P	T	R	S	N	I	S
Query Conservation																								.	.																.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																								.	.																.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	R	T	L	D	V	F	S	G	C	G	G	L	S	E	G	F	H	Q	A	G	I	S	E	T	L	W	A	I	E	M	W	D	P	A	A	Q	A	F	R	L	N	N	P	G	T	T	V	F	T	E	D	C	N	V	L	L	K	L	V	M	A	G	E	V	T	N	S	L	G	Q	R	L	P	Q	K	G	D	V	E
Template Known Secondary structure								T		T	T											T										S	S												T	T	S					S											T	T		S	B		T	T			B				T	T	T		S
Template Predicted Secondary structure
Template SS confidence
		1142	.	.	.	.	.	.	.	1150	.	.	.	.	.	.	.	.	.	1160	.	.	.	.	.	.	.	.	.	1170	.	.	.	.	.	.	.	.	.	1180	.	.	.	.	.	.	.	.	.	1190	.	.	.	.	.	.	.	.	.	1200	.	.	.	.	.	.	.	.	.	1210	.	.	.	.	.	.	.	.	.	1220	.
		273	.	.	.	.	.	.	280	.	.																	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.		.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.
Predicted Secondary structure												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.
Query SS confidence												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.
Query Sequence		W	M	V	C	D	M	V	E	K	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	K	V	A	A	L	M	A	Q	W	L	V	N	G	W	C	R	E	T	I	F	.	N	L	K	L	P	M	K	K	R	Y	E	E	V	S	H	N	L	A	Y	I	Q	A	Q	L	D	E	H	G	I	N	A	Q
Query Conservation												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.
Alig confidence												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.										.	.	.																	.	.
Template Conservation																																																											.	.	.																	.	.
Template Sequence		M	L	C	G	G	P	P	C	Q	G	F	S	G	M	N	R	F	N	S	R	T	Y	S	K	F	K	N	S	L	V	V	S	F	L	S	Y	C	D	Y	Y	R	P	R	F	F	L	L	E	N	V	R	N	F	V	S	Y	R	.	.	.	R	S	M	V	L	K	L	T	L	R	C	L	V	R	M	G	.	.	Y	Q
Template Known Secondary structure										T	T	S			S	S												T	S															S								S	G	G	G	T			.	.	.															T	T	.	.
Template Predicted Secondary structure																																																											.	.	.																	.	.
Template SS confidence
		1222	.	.	.	.	.	.	.	1230	.	.	.	.	.	.	.	.	.	1240	.	.	.	.	.	.	.	.	.	1250	.	.	.	.	.	.	.	.	.	1260	.	.	.	.	.	.	.	.	.	1270	.	.	.	.	.	.	.	.				.	1280	.	.	.	.	.	.	.	.	.	1290	.	.	.	.			.	.
		336	.	.	.	340	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	Q	A	R	Q	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		C	T	F	G	V	L
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		1297	.	.	1300	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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