|   |
209 | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | |
|
. | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | |
|
|
|
|
|
|
. | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | |
. | 270 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |
| . | . |
|
|  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |
| . | . | . | . | . | . | . |
|
|
|  |  |  |  |  |
|
|
|  |  |  |  |
|
|
| . |
|
|  |  |  |  |  |  |
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | A | N | G | M | W | A | V | D | L | G | A | C | P | G | G | W | T | Y | Q | L | V | K | R | . |
. |
N | M | W | V | Y | S | V | D | N | G | P | M | A | Q | S | L | M | D | . |
. |
. |
. |
. |
. |
. |
T | G | Q | V | T | W | L | R | E | D | G | F | K | F | R | P | T | R | . |
S | N | I | S | W | M | V | C | D | M |
Query Conservation |   |
|   |   |
|   |   |
|
|
|
|
|
|
|
|
|
|
|
|   |   |
|   |   |   | . | . |
|   |   |
|   |
|
|
|   |
|   |
|   |   |   |
|   |   | . | . | . | . | . | . | . |   |   |   |
|   |
|   |   |   |
|
|
|   |   |   |
|   |   | . |   |   |
|
|
|
|
|
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |
|
|
|
|
|   |
|   |
|   |   |   |   |   |
|   |   |   |   |
|   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Template Sequence |   |
F | A | R | A | R | T | V | I | D | L | A | G | G | H | G | T | Y | L | A | Q | V | L | R | R | H | P | Q | L | T | G | Q | I | W | D | L | P | T | T | R | D | A | A | R | K | T | I | H | A | H | D | L | G | G | R | V | E | F | F | E | K | N | L | L | D | A | R | N | F | E | G | G | A | A | D | V | V | X | L | N | D |
Template Known Secondary structure |   |
G | T | T |
| S |  |  |  |  |  | T |
| T | T |
|  |  |  |  |  |  |  |  |  |
| T | T |
|  |  |  |  |  |  |
| G | G | G |  |  |  |  |  |  |  |  |  |  | T | T |
| T | T | T |  |  |  |  |  |
|
| T | T |
| G | G | G | G | T | T |
|
|  |  |  |  |  |  |  | S |
Template Predicted Secondary structure |   |
|
|
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
174 | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . |
  |
  |   |
279 | 280 | |
|
|
. | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | |
. | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
| . | . | . |
|  |  |  |  |  |  |  |  |  |  |  |  |  |
| . |
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |
Query SS confidence |   |
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
V | E | . |
. |
. |
K | P | A | K | V | A | A | L | M | A | Q | W | L | V | N | . |
G | W | C | R | E | T | I | F | N | L | K | L | P | M | K | K | R | Y | E | E | V | S | H | N | L | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
A | Y | I | Q | A | Q | L | D | E | H | G | I | N | A | Q | I | Q |
Query Conservation |   |
  |   | . | . | . |   |
|   |
|   |   |   |
|   |   |   |
|
|   |   | . |   |   |   |   |   |
|
|   |
|
|
|
|
|
|
|   |
|   |   |   |
|   |   |   |
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |   |
|   |   |   |   |   |   |   |
|   |   |   |   |   |   |
Alig confidence |   |
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
Template Conservation |   |
  |
|
|   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |
|   |
|
|
|   |
|
|
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |
|   |   |   |   |
|   |   |
|
| . | . | . | . |
|   |
Template Sequence |   |
C | L | H | Y | F | D | A | R | E | A | R | E | V | I | G | H | A | A | G | L | V | K | P | G | G | A | L | L | I | L | T | X | T | X | N | D | D | R | V | T | P | A | L | S | A | D | F | S | L | H | X | X | V | N | T | N | H | G | E | L | H | P | T | P | W | I | A | G | V | V | R | D | A | G | . |
. |
. |
. |
L | A |
Template Known Secondary structure |   |
| G | G | G | S |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
| T | T | S | S |
| S |  |  |  |  |  |  |  |  |  |  |  |  |  | S | T | T |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  | T | T | . | . | . | . |
|  |
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
| . | . | . | . |
|  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
254 | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | |
|
|
|
. | . |
  |
  |   |
338 | . | 340 | . | . | . | . | . | . | . | . | . | 350 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
A | R | Q | L | Y | H | D | R | E | E | V | T | V | H | V | R | R | I | W | A |
Query Conservation |   |
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |   |
|   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |   |   | . |   |
|   |   |   |
|   |   |   |
Template Sequence |   |
V | G | E | R | S | I | G | R | Y | T | . |
L | L | I | G | Q | R | S | S | G |
Template Known Secondary structure |   |
 |  |  |  |  |  | T | T |  |  | . |  |  |  |  |  |
|
| T | T |
Template Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|
|  | . |  |  |  |  |  |
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
330 | . | . | . | . | . | . | . | . | . | |
340 | . | . | . | . | . | . | . | . |
  |