Job Description P0ADR6 Confidence 99.89% Date Thu Jan 5 11:21:40 GMT 2012 Rank 3 Aligned Residues 161 % Identity 26% Template c3lkzB_ PDB info PDB header:viral protein Chain: B: PDB Molecule:non-structural protein 5; PDBTitle: structural and functional analyses of a conserved hydrophobic pocket2 of flavivirus methyltransferase Resolution 2.00 Å

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		151	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230
Predicted Secondary structure
Query SS confidence
Query Sequence		F	F	I	A	P	G	C	C	Y	T	G	Y	S	Y	S	N	N	N	S	P	F	Y	M	G	I	P	R	L	K	F	P	A	D	A	P	S	R	S	T	L	K	L	E	E	A	F	H	V	F	I	P	A	D	E	W	D	E	R	L	A	N	G	M	W	A	V	D	L	G	A	C	P	G	G	W	T	Y	Q	L	V
Query Conservation
Alig confidence																																.	.	.																	.	.	.	.	.	.	.	.
Template Conservation																																.	.	.																	.	.	.	.	.	.	.	.
Template Sequence		F	T	R	Y	R	K	E	A	I	I	E	V	D	R	S	A	A	K	H	A	R	K	E	G	N	V	T	G	G	H	.	.	.	P	V	S	R	G	T	A	K	L	R	W	L	V	E	R	R	.	.	.	.	.	.	.	.	F	L	E	P	V	G	K	V	I	D	L	G	C	G	R	G	G	W	C	Y	Y	M	A
Template Known Secondary structure						T	T	T	T																T			S	S			.	.	.		S	S	T											T	T	.	.	.	.	.	.	.	.	S											T		T	T								T
Template Predicted Secondary structure																																.	.	.																	.	.	.	.	.	.	.	.
Template SS confidence
		24	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.				.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.									70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.
				231	.	.	.	.	.	.	.	.	240	.	.							.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280											.	.	.	.	.	.	.	.	.	290	.	.
Predicted Secondary structure		.	.													.	.	.	.	.	.																																							.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.													.	.	.	.	.	.																																							.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	K	R	N	M	W	V	Y	S	V	D	N	G	.	.	.	.	.	.	P	M	A	Q	S	L	M	D	T	G	Q	V	T	W	L	R	E	D	G	F	K	F	R	P	T	R	S	N	I	S	W	M	V	C	D	M	V	E	.	.	.	.	.	.	.	.	.	.	K	P	A	K	V	A	A	L	M	A	Q	W
Query Conservation		.	.													.	.	.	.	.	.																																							.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.													.	.	.	.	.	.																												.											.	.	.	.	.	.	.	.	.	.
Template Conservation																																																	.
Template Sequence		T	Q	K	R	V	Q	E	V	R	G	Y	T	K	G	G	P	G	H	E	E	P	Q	L	V	Q	S	Y	G	W	N	I	V	T	M	K	S	G	V	D	V	F	Y	R	P	S	E	C	.	C	D	T	L	L	C	D	I	G	E	S	S	S	S	A	E	V	E	E	H	R	T	I	R	V	L	E	M	V	E	D	W
Template Known Secondary structure		T		T	T											S	T	T	S								B	T	T	G	G	G						S			T	T	S	S					.		S											S
Template Predicted Secondary structure																																																	.
Template SS confidence
		93	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.		140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.
		293	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	V	N	G	W	C	R	E	T	I	F	N	L	K	L	P	M	K	K	R	Y	E	E	V	S	H	N	L	A	Y	I	Q	A	Q	L
Query Conservation
Alig confidence							.						.	.								.
Template Conservation							.						.	.								.
Template Sequence		L	H	R	G	P	.	R	E	F	C	V	.	.	K	V	L	C	P	Y	M	.	P	K	V	I	E	K	M	E	L	L	Q	R	R	Y
Template Known Secondary structure			T	T			.						.	.			S		T	T	S	.
Template Predicted Secondary structure							.						.	.								.
Template SS confidence
		172	.	.	.	.		.	.	.	180	.			.	.	.	.	.	.	.		.	190	.	.	.	.	.	.	.	.	.	200	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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