Return to main results Retrieve Phyre Job Id

Job DescriptionP0ADR6
Confidence98.47%DateThu Jan 5 11:21:40 GMT 2012
Rank20Aligned Residues156
% Identity14%Templatec3id5F_
PDB info PDB header:transferase/ribosomal protein/rnaChain: F: PDB Molecule:fibrillarin-like rrna/trna 2'-o-methyltransferase; PDBTitle: crystal structure of sulfolobus solfataricus c/d rnp assembled with2 nop5, fibrillarin, l7ae and a split half c/d rna
Resolution4.01 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   191........200.........210.........220.........230. ........240... ......250.........260..
Predicted Secondary structure 


















...





.....








Query SS confidence 








































. . .











. . . . .


















Query Sequence  KLEEAFHVFIPADEWDERLANGMWAVDLGACPGGWTYQLVK. . . RNMWVYSVDNGP. . . . . MAQSLMDTGQVTWLREDGF
Query Conservation 

 

   
         
  
  











  
  ... 
  
 


 
 .....
   
     
 
   


Alig confidence 







....




























...











.....


















Template Conservation 

 
    .... 
       
  




 
 
     

  

  
 
 


 
      
        

  
  
  
Template Sequence  KLAGAILK. . . . GLKTNPIRKGTKVLYLGAASGTTISHVSDIIELNGKAYGVEFSPRVVRELLLVAQRRPNIFPLLADAR
Template Known Secondary structure  T....T
S




TT

T
TTS
TTS



TT

TT
Template Predicted Secondary structure  ....
























Template SS confidence 















































































   60....... ..70.........80.........90.........100.........110.........120.........130.....
 
   263..... .270.........280.........290.........300.........310.........320.........330.........
Predicted Secondary structure 


...






















Query SS confidence 





. . .






































































Query Sequence  KFRPTR. . . SNISWMVCDMVEKPAKVAALMAQWLVNGWCRETIFNLKLPMKKRYEEVSHNLAYIQAQLDEHGINAQIQAR
Query Conservation     
  ...  







   
 
   
   

       

 






 
   
   
  
       
      

Alig confidence 





...











































....






















Template Conservation              
 
             
    
 




 


   
     .... 
        

  

   
 
 
Template Sequence  FPQSYKSVVENVDVLYVDIAQPDQTDIAIYNAKFFLKVNGDMLLVIKAVTKDP. . . . KEIYKTEVEKLENSNFETIQIIN
Template Known Secondary structure 
GGGTTTT




S
TT




SS....SSSTTTTT
Template Predicted Secondary structure 






















....


Template SS confidence 















































































   136...140.........150.........160.........170.........180........ .190.........200.........210.
 
   340.........350....
Predicted Secondary structure 




Query SS confidence 














Query Sequence  QLYHDREEVTVHVRR
Query Conservation 










   
Alig confidence 














Template Conservation 
 

   
  
   
Template Sequence  LDPYDKDHAIVLSKY
Template Known Secondary structure 
TTTSSS
Template Predicted Secondary structure 







Template SS confidence 














   216...220.........230
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions