Job Description P0ADR6 Confidence 89.38% Date Thu Jan 5 11:21:40 GMT 2012 Rank 277 Aligned Residues 77 % Identity 19% Template c3h7hB_ PDB info PDB header:transcription Chain: B: PDB Molecule:transcription elongation factor spt5; PDBTitle: crystal structure of the human transcription elongation factor dsif,2 hspt4/hspt5 (176-273) Resolution 1.55 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.								.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
Predicted Secondary structure																									.	.	.	.	.	.	.
Query SS confidence																									.	.	.	.	.	.	.
Query Sequence		V	V	L	L	C	R	P	G	F	E	K	E	C	A	A	E	I	T	D	K	A	G	Q	.	.	.	.	.	.	.	R	E	I	F	G	F	A	R	V	K	E	N	A	G	Y	V	I	Y	E	C	Y	Q	P	D	D	G	D	K	L	I	R	E	L	P	F	S	S	L	I	F	A	R	Q	W	F	V	V	G	E	L
Query Conservation																									.	.	.	.	.	.	.
Alig confidence																									.	.	.	.	.	.	.
Template Conservation
Template Sequence		W	T	V	K	C	K	I	G	E	E	R	A	T	A	I	S	L	M	R	K	F	I	A	Y	Q	F	T	D	T	P	L	Q	I	K	S	V	V	A	P	E	H	V	K	G	Y	I	Y	V	E	A	Y	K	Q	T	H	V	K	Q	A	I	E	G	V	G	N	L	R	L	G	Y	W	N	Q	Q	M	V	P	I	K	E
Template Known Secondary structure								T	T																	T	T	S	S	S											T	T			S							S	S									T	T		G	G	G	G	G	G	S	S							G	G	G
Template Predicted Secondary structure
Template SS confidence
		180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.
		77	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		L	Q	H	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		M	T	D	V
Template Known Secondary structure		T	T	G	G
Template Predicted Secondary structure
Template SS confidence
		260	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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