Job Description P0ADR6 Confidence 69.75% Date Thu Jan 5 11:21:40 GMT 2012 Rank 296 Aligned Residues 139 % Identity 9% Template c3g7uA_ PDB info PDB header:transferase Chain: A: PDB Molecule:cytosine-specific methyltransferase; PDBTitle: crystal structure of putative dna modification methyltransferase2 encoded within prophage cp-933r (e.coli) Resolution 1.75 Å

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		213	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.		.	.	.	.	240	.	.	.	.	.	.	.	.	.			250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.									.	.	.	270	.	.	.	.	.	.	.	.	.	280	.
Predicted Secondary structure																									.															.	.																		.	.	.	.	.	.	.	.
Query SS confidence																									.															.	.																		.	.	.	.	.	.	.	.
Query Sequence		M	W	A	V	D	L	G	A	C	P	G	G	W	T	Y	Q	L	V	K	R	N	M	W	.	V	Y	S	V	D	N	G	P	M	A	Q	S	L	M	.	.	D	T	G	Q	V	T	W	L	R	E	D	G	F	K	F	R	P	.	.	.	.	.	.	.	.	T	R	S	N	I	S	W	M	V	C	D	M	V	E	K
Query Conservation																									.															.	.																		.	.	.	.	.	.	.	.
Alig confidence																									.															.	.																		.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	N	V	I	D	L	F	S	G	V	G	G	L	S	L	G	A	A	R	A	G	F	D	V	K	M	A	V	E	I	D	Q	H	A	I	N	T	H	A	I	N	F	P	R	S	L	H	V	Q	E	D	V	S	L	L	N	A	E	I	I	K	G	F	F	K	N	D	M	P	I	D	G	I	I	G	G	P	P	C	Q
Template Known Secondary structure								T		T	T	S										T									S													T	T	S							G	G	G												S
Template Predicted Secondary structure
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		282							.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.		.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340						.	.	.	.	.	.	.	.	.
Predicted Secondary structure			.	.	.	.	.	.																						.																																						.	.	.	.	.
Query SS confidence			.	.	.	.	.	.																						.																																						.	.	.	.	.
Query Sequence		P	.	.	.	.	.	.	A	K	V	A	A	L	M	A	Q	W	L	V	N	G	W	C	R	E	T	I	F	.	N	L	K	L	P	M	K	K	R	Y	E	E	V	S	H	N	L	A	Y	I	Q	A	Q	L	D	E	H	G	I	N	A	Q	I	Q	A	R	Q	.	.	.	.	.	L	Y	H	D	R	E	E	V	T
Query Conservation			.	.	.	.	.	.																						.																																						.	.	.	.	.
Alig confidence			.	.	.	.	.	.																						.														.	.	.																						.	.	.	.	.
Template Conservation																																												.	.	.
Template Sequence		G	F	S	D	D	S	R	N	Q	L	Y	M	H	F	Y	R	L	V	S	E	L	Q	P	L	F	F	L	A	E	N	V	P	G	I	M	Q	E	K	Y	S	G	I	.	.	.	R	N	K	A	F	N	L	V	S	G	D	Y	D	I	L	D	P	I	K	V	K	A	S	D	Y	G	A	P	T	I	R	T	R	Y	F
Template Known Secondary structure		T	T																						S								T	T	T	T		G	G	G				.	.	.										T	T											G	G	G	G	T		S	B
Template Predicted Secondary structure																																												.	.	.
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.				.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
		350	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	H	V	R	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	I	G	V	K
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		165	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions