Job Description P0ADR6 Confidence 94.14% Date Thu Jan 5 11:21:40 GMT 2012 Rank 252 Aligned Residues 70 % Identity 16% Template c3bwbA_ PDB info PDB header:transferase Chain: A: PDB Molecule:spermidine synthase; PDBTitle: crystal structure of the apo form of spermidine synthase from2 trypanosoma cruzi at 2.5 a resolution Resolution 2.50 Å

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		213	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.			.	.	.	.	.	240	.	.	.	.	.	.	.	.	.												250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.			.	.	.	.	270	.	.	.	.	.	.	.
Predicted Secondary structure																								.	.																.	.	.	.	.	.	.	.	.	.	.																	.	.
Query SS confidence																								.	.																.	.	.	.	.	.	.	.	.	.	.																	.	.
Query Sequence		M	W	A	V	D	L	G	A	C	P	G	G	W	T	Y	Q	L	V	K	R	N	M	.	.	W	V	Y	S	V	D	N	G	P	M	A	Q	S	L	M	.	.	.	.	.	.	.	.	.	.	.	D	T	G	Q	V	T	W	L	R	E	D	G	F	K	F	R	.	.	P	T	R	S	N	I	S	W	M	V	C	D
Query Conservation																								.	.																.	.	.	.	.	.	.	.	.	.	.																	.	.
Alig confidence																								.	.																.	.	.	.	.	.	.	.	.	.	.																	.	.
Template Conservation
Template Sequence		E	R	V	L	I	I	G	G	G	D	G	G	V	L	R	E	V	L	R	H	G	T	V	E	H	C	D	L	V	D	I	D	G	E	V	X	E	Q	S	K	Q	H	F	P	Q	I	S	R	S	L	A	D	P	R	A	T	V	R	V	G	D	G	L	A	F	V	R	Q	T	P	D	N	T	Y	D	V	V	I	I	D
Template Known Secondary structure										T	T	S							T	T		T	T									S																	G	G	G	G		T	T						S								T	S		T	T
Template Predicted Secondary structure
Template SS confidence
		97	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.
		278	.	280	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	V	E	K	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	T	D	P	A
Template Known Secondary structure			S
Template Predicted Secondary structure
Template SS confidence
		177	.	.	180	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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