Return to main results Retrieve Phyre Job Id

Job DescriptionP0ADR6
Confidence99.64%DateThu Jan 5 11:21:40 GMT 2012
Rank8Aligned Residues129
% Identity19%Templatec2wa1A_
PDB info PDB header:transferaseChain: A: PDB Molecule:non-structural protein 5; PDBTitle: structure of the methyltransferase domain from modoc virus,2 a flavivirus with no known vector (nkv)
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   185....190.........200.........210.........220.........230.. .......240.. .......250......
Predicted Secondary structure 





















..



......






Query SS confidence 















































. .









. . . . . .













Query Sequence  PSRSTLKLEEAFHVFIPADEWDERLANGMWAVDLGACPGGWTYQLVKR. . NMWVYSVDNG. . . . . . PMAQSLMDTGQVTW
Query Conservation 



 


 

   
         
  
  











  
   ..
  
 


 
...... 
   
     
 
Alig confidence 














......
..























..









......













Template Conservation   

   

       ...... ..      
 


  





          
 
 


      
       


   
Template Sequence  VSRGTAKLAWIDERG. . . . . . G. . VELKGTVVDLGCGRGSWSYYAASQPNVREVKAYTLGTSGHEKPRLVETFGWNLITF
Template Known Secondary structure 

TT......S..



T
TTSTSTT


STTS







TTGGG
Template Predicted Secondary structure 

......
..
































Template SS confidence 















































































   34.....40........ . 50.........60.........70.........80.........90.........100.....
 
   257..260.........270........ .280.........290.........300.........310.........320..
Predicted Secondary structure 









..........












Query SS confidence 





















. . . . . . . . . .











































Query Sequence  LREDGFKFRPTRSNISWMVCDM. . . . . . . . . . VEKPAKVAALMAQWLVNGWCRETIFNLKLPMKKRYEEVSHNLAY
Query Conservation     


   
    







..........   
 
   
   

       

 






 
   
   
  
Alig confidence 












.







..........











































Template Conservation       
       . 
 





 
  
   
 

   

 

   
   


 

 


 
  
  
  
     
Template Sequence  KSKVDVTKMEPFQ. ADTVLCDIGESNPTAAVEASRTLTVLNVISRWLEYNQGCGFCVKVLNPYSCDVLEALMKMQA
Template Known Secondary structure 
S

TTT




.
S





SSSTT
S


S
Template Predicted Secondary structure 




.


















Template SS confidence 











































































   128.130.........140 .........150.........160.........170.........180.........190.........200..
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions